Job Description P76594 Confidence 100.00% Date Thu Jan 5 12:24:56 GMT 2012 Rank 6 Aligned Residues 260 % Identity 20% Template c1oi7A_ PDB info PDB header:synthetase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: the crystal structure of succinyl-coa synthetase alpha2 subunit from thermus thermophilus Resolution 1.23 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.															.	.
Query SS confidence																																																	.	.															.	.
Query Sequence		L	E	A	L	L	R	P	K	S	I	A	V	I	G	A	S	M	K	P	N	R	A	G	Y	L	M	M	R	N	L	L	A	G	G	F	N	G	P	V	L	P	V	T	P	A	W	K	.	.	A	V	L	G	V	L	A	W	P	D	I	A	S	L	.	.	P	F	T	P	D	L	A	V	L	C	T	N	A	S	R
Query Conservation																																																	.	.															.	.
Alig confidence																		.	.	.																		.											.	.															.	.
Template Conservation																		.	.	.																		.
Template Sequence		M	I	L	V	N	R	E	T	R	V	L	V	Q	G	I	T	.	.	.	G	R	E	G	Q	F	H	T	K	Q	M	L	T	Y	G	T	K	.	I	V	A	G	V	T	P	G	K	G	G	M	E	V	L	G	V	P	V	Y	D	T	V	K	E	A	V	A	H	H	E	V	D	A	S	I	I	F	V	P	A	P	A
Template Known Secondary structure				S			T	T							T	T	T	.	.	.	S														T			.							T	T		T	T				T	T					S	S								S			S
Template Predicted Secondary structure																		.	.	.																		.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		N	L	A	L	L	E	E	L	G	E	K	G	C	K	T	C	I	I	L	S	A	P	A	S	Q	.	.	H	E	D	L	R	A	C	A	L	R	H	N	M	R	L	L	G	P	N	S	L	G	L	L	A	P	W	Q	G	L	N	A	S	F	S	P	V	P	I	K	R	G	K	L	A	F	I	S	Q	S	A	A	V
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		A	A	D	A	A	L	E	A	A	H	A	G	I	P	L	I	V	L	I	T	E	G	I	P	T	L	D	M	V	R	A	V	E	E	I	K	A	L	G	S	R	L	I	G	G	N	C	P	G	I	I	S	A	E	E	T	K	I	G	I	M	P	G	H	V	F	K	R	G	R	V	G	I	I	S	R	S	G	T	L
Template Known Secondary structure												T	T		S							S																		T						S	S	S						T	T	T					S	S		G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		S	N	T	I	L	D	W	A	Q	Q	R	K	M	G	F	S	Y	F	I	A	L	G	D	S	L	D	I	.	.	D	V	D	E	L	L	D	Y	L	A	R	D	S	K	T	S	A	I	L	L	Y	L	E	Q	L	S	D	A	R	R	F	V	S	A	A	R	S	A	S	R	N	K	P	I	L	V	I	K	S	G	R
Query Conservation																													.	.
Alig confidence																													.	.
Template Conservation
Template Sequence		T	Y	E	A	A	A	A	L	S	Q	A	G	L	G	T	T	T	T	V	G	I	G	G	D	P	V	I	G	T	T	F	K	D	L	L	P	L	F	N	E	D	P	E	T	E	A	V	V	L	I	G	E	I	G	G	S	D	E	E	E	A	A	A	W	V	K	D	H	M	K	K	P	V	V	G	F	I	G	G	R
Template Known Secondary structure												T	T											S	S	S			S	S											T		T	T										S	S	S	S															S							S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	A	A	Q	R	L	L	N	T	T	A	G	M	D	P	A	W	D	A	A	I	Q	R	A	G	L	L	R	V	Q	D	T	H	E	L	F	S	A	V	E	T	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	.	G	T	P	E	S	K	L	R	A	F	A	E	A	G	I	P	V	A	D	T	I	D	E	I	V	E	L	V	K	K	A
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.		S												T			B		S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255												.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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