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Job DescriptionP51025
Confidence99.37%DateThu Jan 5 12:04:51 GMT 2012
Rank176Aligned Residues207
% Identity15%Templatec3qmwD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:thioesterase; PDBTitle: redj with peg molecule bound in the active site
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  PKAANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHY
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Template Sequence  PPDPAAAPLRLVCFPYAGGTVSAF. . . RGWQERLGD. EVAVVPVQLPGRGLRLRERPYDT. . . . . . . . . . . . . . . . . . . .
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TTS
S

TT

GGGG...TT
S.S


TTSGGGTTS



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   25....30.........40........ .50....... ..60.........70.........80
 
   116...120.........130.........140.........150.........160.........170....
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Query Sequence  KMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSP. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . MEPLAEAVADALEEHRLTHD. YALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALRE
Template Known Secondary structure  ..TTT
SSS.TTT



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S


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TTS
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   81........90.........100 .........110.........120.........130.........140.........150.......
 
   175....180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  . . . . . . . SQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEMNIKTLIR
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Template Sequence  VIRDLGGLDDTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPE. MVEAW. . . RPYTTGSFLRR
Template Known Secondary structure  TTS



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BSS
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   158.160.........170.........180.........190.........200.........210....... ..220.. .......230...
 
   248.250.........260.........270....
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Query Sequence  YHEGYDHSYYFVSSFIGEHIAYHANKL
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Template Sequence  HLPG. NHFFLNGGPSRDRLLAHLGTEL
Template Known Secondary structure  SS.
TTGGGSS
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   236... 240.........250.........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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