Job Description P51025 Confidence 99.87% Date Thu Jan 5 12:04:51 GMT 2012 Rank 80 Aligned Residues 231 % Identity 10% Template c3mveB_ PDB info PDB header:lyase Chain: B: PDB Molecule:upf0255 protein vv1_0328; PDBTitle: crystal structure of a novel pyruvate decarboxylase Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	G	W	Q	N	M	Y	R	H	Y	S	Q	S	L	K	C	E	M	N	V	G	V	Y	L	P	P	K	A	A	N	E	K	L	P	V	L	Y	W	L	S	G	L	T	C	N	E	Q	N	F	I	T	K	S	G	M	Q	R	Y	A	A	E	H	N	I	I	V	V	A	P	D	T	S	P	R	G	S	H	V	A
Query Conservation
Alig confidence												.	.																	.	.																				.	.
Template Conservation												.	.																	.	.																				.	.
Template Sequence		S	K	Y	I	I	K	Q	L	E	I	.	.	P	F	E	K	G	K	I	T	A	H	L	H	L	T	N	T	.	.	D	K	P	H	P	V	V	I	V	S	A	G	L	D	S	L	Q	T	D	.	.	M	W	R	L	F	R	D	H	L	A	K	H	D	I	A	M	L	T	V	D	M	P	S	V	G	Y	S	S	K
Template Known Secondary structure			S	S								.	.			T	T										S		S	.	.	S	S											T	T	S		G	G	G	.	.							T	T	G	G	G	G	T									T	T	S	G	G	G	T	T
Template Predicted Secondary structure												.	.																	.	.																				.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		D	A	D	R	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	A	P	W	N	E	H	Y	K	M	Y	D	Y	I	R	N	E	L	P	D	L	V	M	H	H	F	P	.	A	T	A	K	K	S	I	S	G	H	S	M	G	G	L	G	A	L	V	L	A	L	R	N	P	D	E	Y	V	S	V	S	A	F
Query Conservation																																															.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	L	T	E	D	Y	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	Q	A	V	L	N	E	L	F	S	I	P	Y	V	D	H	H	R	V	G	L	I	G	F	R	F	G	G	N	A	M	V	R	L	S	F	L	E	Q	E	K	I	K	A	C	V	I	L
Template Known Secondary structure		S				S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G		T	T												T													T	G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.																							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		169	170	.	.	.													.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query Sequence		S	P	I	V	S	.	.	.	.	.	.	.	.	.	.	.	.	P	S	Q	V	P	W	G	Q	Q	A	F	A	A	Y	L	A	E	N	K	D	A	W	L	D	Y	D	P	V	S	L	.	.	.	.	.	.	I	S	Q	G	Q	R	V	A	E	I	M	V	D	Q	G	L	S	D	D	F	Y	A	E	Q	L	R	T
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.																									.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	A	P	I	H	D	I	F	A	S	P	Q	K	L	Q	Q	M	P	K	M	Y	L	D	V	L	A	S	R	L	G	K	S	V	V	D	I	Y	S	L	S	G	Q	M	A	A	W	S	L	K	V	Q	G	F	L	S	S	R	K	T	K	V	P	I	L	A	M	S	L	E	G	D	P	V	S	P	Y	S	.	.	.
Template Known Secondary structure		S				S										T	T	S												T	T		S											G	G	G	G		T	T	T	T	T	T	T	T	S	S		B	S	S								T	T		S	S	S				.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	L	E	K	I	C	Q	E	M	N	I	K	T	L	I	R	Y	H	E	G	Y	D	H	S	Y	Y	F	V	S	S	F	I	G	E	H	I	A	Y	H	A	N	K	L
Query Conservation
Alig confidence		.	.																				.
Template Conservation		.	.																				.
Template Sequence		.	.	D	N	Q	M	V	A	F	F	S	T	Y	G	K	A	K	K	I	S	S	.	K	T	I	T	Q	G	Y	E	Q	S	L	D	L	A	I	K	W	L	E	D	E	L
Template Known Secondary structure		.	.								T	B	T	T								S	.	S		S	T	T	S
Template Predicted Secondary structure		.	.																				.
Template SS confidence
				373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions