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Job DescriptionP51025
Confidence98.66%DateThu Jan 5 12:04:51 GMT 2012
Rank244Aligned Residues207
% Identity13%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  GVYLPPKAANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAP
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Template Sequence  SVVLQ. GLPMVARKTLFMLPDGGGSAFSYASLPRL. . . . . KSDTAVVGLNCPYARDPENMNCTHG. . . . . . . . . . . . . . .
Template Known Secondary structure  .S
TTTSS

TT

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   1854.... .1860.........1870.........1880....... ..1890.........1900.........1910..
 
   111........120.........130.........140.........150...... ...160.........170.........180.......
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Query Sequence  WNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLAL. . . RNPDEYVSVSAFSPIVSPSQVPWGQQAFAAY
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Template Sequence  . . . . . . . . . AMIESFCNEIRRRQPRG. PYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHC
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   1913......1920......... 1930.........1940.........1950.........1960.........1970.........1980..
 
   188.190 .........200.........210.........220..
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Query Sequence  LAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKDAWLDYDPVSLISQGQRVAEIMVDQGLSDD
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Template Sequence  NSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRT
Template Known Secondary structure  TTTTTTSSSS
SSS
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   1983......1990.........2000.........2010.........2020.........2030.........2040.........2050.........2060..
 
   223......230.........240.........250.........260.........270....
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Query Sequence  FYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKL
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Template Sequence  EFGPD. GWDTIM. . . . . PGASFDIVRADGANHFTLMQKEHVSIISDLIDRVM
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T.TS.....TT

TTGGGSTTTTT
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   2063.... ..2070... ......2080.........2090.........2100........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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