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Job DescriptionP51025
Confidence99.86%DateThu Jan 5 12:04:51 GMT 2012
Rank86Aligned Residues221
% Identity7%Templatec3h04A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 staphylococcus aureus subsp. aureus mu50
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20. ........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  MYRHYS. QSLKCEMNVGVYLPPKAANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRY
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Template Sequence  EIKYKVITKDAFALPYTIIKAKNQPTK. . GVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVS. . . . . .
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   3......10.........20......... 30.........40.........50.........60.........70....
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  DLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSP
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Template Sequence  . . . . . . . . . . . . . . . . . . . LDCIIEDVYASFDAIQSQY. . SNCPIFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRINT
Template Known Secondary structure  ...................TT..TTS
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   75....80.........90... ......100.........110.........120.........130...
 
   175....180.........190 .........200.........210....
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Query Sequence  SQVPWGQQAFAAYLAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKDAWLDYDPVSLISQGQRVAEIM
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Template Sequence  EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLPPVF
Template Known Secondary structure  S

TTS
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   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
   215....220.........230.........240.........250...... ...260.........270
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Query Sequence  VDQGLSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSY. . . . . YFVSSFIGEHIAYH
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Template Sequence  IAHCNGDYDVPVE. . . . . ESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFL
Template Known Secondary structure  TT
SSS
T.....TT
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   214.....220...... ...230.........240.........250.........260.........
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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