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Job DescriptionP51025
Confidence99.31%DateThu Jan 5 12:04:51 GMT 2012
Rank185Aligned Residues200
% Identity11%Templatec3dqzB_
PDB info PDB header:lyaseChain: B: PDB Molecule:alpha-hydroxynitrile lyase-like protein; PDBTitle: structure of the hydroxynitrile lyase from arabidopsis2 thaliana
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  PVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRN
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Template Sequence  HHFVLVHNAYHGAWIWY. . . KLKPLLESAGHRVTAVELAASGIDPRPIQAVETVD. . . . . . . . . . . . . . . . . . . . . . EYS
Template Known Secondary structure 


TT

GGGGT...TTT


TTSTT
SS
GGG

S......................
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   5....10.........20. ........30.........40.........50...... ...
 
   124.....130.........140.........150.........160.........170.........180.........190
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Query Sequence  ELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAE. . . . . . . . . . . . .
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Template Sequence  KPLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHET
Template Known Secondary structure  TS
TT

TTTT
GGGS




SSS
TTTSTT

TT
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   60.........70.........80.........90.........100.........110.........120.........130.........
 
   191........200.........210.........220.........230..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPN
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Template Sequence  RNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCD. . . . .
Template Known Secondary structure  TT

TSTTS
TT




TS



TTTGGGSTT
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   140.........150.........160.........170.........180.........190.........200.........210....
 
   233......240.........250.........260.........270.....
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Query Sequence  LEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLN
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Template Sequence  FIRWMIDNFNVSKVYEIDGGDH. . MVMLSKPQKLFDSLSAIAT
Template Known Secondary structure  S

S
TT

S..
S
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   215....220.........230...... ...240.........250.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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