Job Description P51025 Confidence 99.57% Date Thu Jan 5 12:04:51 GMT 2012 Rank 140 Aligned Residues 131 % Identity 16% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		28	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		M	N	V	G	V	Y	L	P	P	K	A	A	.	N	E	K	L	P	V	L	Y	W	L	S	G	L	T	C	N	E	Q	N	F	I	T	K	S	G	M	Q	R	Y	A	A	E	H	N	I	I	V	V	A	P	D	T	S	P	R	G	S	H	V	A	D	A	D	R	Y	D	L	G	Q	G	A	G	F	Y	L	N	A
Query Conservation														.
Alig confidence														.																				.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	L	N	I	Y	V	P	T	I	R	D	S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	.	G	N	L	Y	D	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	Q	A	A	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S			S											S	S	S	S	S			.	T	T	T	S										T																	B		S	S	S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		T	Q	A	P	W	N	E	H	Y	K	M	Y	D	Y	I	R	N	E	L	P	D	L	V	M	H	H	F	P	A	T	A	K	K	S	I	S	G	H	S	M	G	G	L	G	A	L	V	L	A	L	R	N	P	D	.	.	.	E	Y	V	S	V	S	A	F	S	P	I	V
Query Conservation																																																								.	.	.
Alig confidence		.	.	.																																																				.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	G	N	Y	G	L	L	D	L	I	Q	A	L	R	W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H	Y	S	E	K	G	L	F	Q	R	A	I	A	Q	S	G	T	A
Template Known Secondary structure		.	.	.	B																			G	G	G	G	T												T										T	T	S	T	T	S		T	T	S								T			S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions