Return to main results Retrieve Phyre Job Id

Job DescriptionP51025
Confidence100.00%DateThu Jan 5 12:04:51 GMT 2012
Rank13Aligned Residues246
% Identity13%Templatec3azqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aminopeptidase; PDBTitle: crystal structure of puromycin hydrolase s511a mutant complexed with2 pgg
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30........ .40.........50.........60.........70.........80......
Predicted Secondary structure 







.....






















Query SS confidence 


























. . . . .















































Query Sequence  GWQNMYRHYSQSLKCEMNVGVYLPPKA. . . . . ANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGS
Query Conservation 
        
   
      



   .....     


  


 
                      

         
Alig confidence 










.














.....






















.























Template Conservation             . 
         
             
 
   



        .          
  
     

  
Template Sequence  PEPQIRTFTAP. DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVL. DLDVAYFTSRGIGVADVNYGGSTG
Template Known Secondary structure 



T.TS




SS

TT




SSSS




S
.
TTT

TT
SS
Template Predicted Secondary structure 



.






























.










Template SS confidence 















































































   389390......... 400.........410.........420.........430.........440.. .......450.........460......
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  HVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVS
Query Conservation                                    
  

   
           
 
 
 

  

      
  
  
 
Alig confidence 











..............












































.







Template Conservation   
          ..............       
              
  
  
 
 
 

         .   
 
 
Template Sequence  YGRAYRERLRGR. . . . . . . . . . . . . . WGVVDVEDCAAVATALAEEGTADRARLAVRGGAAGGWTAASSLVS. TDVYACGT
Template Known Secondary structure  S
TTTT
..............TTTTSS
TTSTS.



S
Template Predicted Secondary structure 




..............








.



Template SS confidence 















































































   467..470........ .480.........490.........500.........510.........520... ......530.
 
   167..170....... ..180.........190.........200.........210.........220.........230.......
Predicted Secondary structure 








.........






















Query SS confidence 










. . . . . . . . .



























































Query Sequence  AFSPIVSPSQV. . . . . . . . . PWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKIC
Query Conservation 
 

       .........                                  
  
  
  
               
Alig confidence 










.........






























..
















.








Template Conservation        
                                  

        .. 
 
   
  
  
   .        
Template Sequence  VLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVR. . VPFLLLQGLEDPVCPPE. QCDRFLEAV
Template Known Secondary structure  S



TT
S
GGGTTTT

TTT
TTS
TGGGGGG

..S
TT
SSS
T.
Template Predicted Secondary structure 




















..









.
Template SS confidence 















































































   532.......540.........550.........560.........570.........580.. .......590......... 600........
 
   238.240.........250...... ...260.........270.......
Predicted Secondary structure 









...



Query SS confidence 


















. . .




















Query Sequence  QEMNIKTLIRYHEGYDHSY. . . YFVSSFIGEHIAYHANKLNMR
Query Conservation     
         
  
  ...          
      
   
Alig confidence 


















...




















Template Conservation     
        
   
                      
   
Template Sequence  AGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVE
Template Known Secondary structure  TTS


TT

SS

STT

Template Predicted Secondary structure 
















Template SS confidence 










































   609610.........620.........630.........640.........650.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions