Job Description P51025 Confidence 100.00% Date Thu Jan 5 12:04:51 GMT 2012 Rank 28 Aligned Residues 258 % Identity 13% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		E	L	I	E	K	H	V	S	F	G	G	W	Q	N	M	Y	R	H	Y	S	Q	S	L	K	C	E	M	N	V	G	V	Y	L	P	P	K	A	A	.	N	E	K	L	P	V	L	Y	W	L	S	G	L	T	C	N	E	Q	N	F	I	T	K	S	G	M	Q	R	Y	A	A	E	H	N	I	I	V	V	A	P	D
Query Conservation																																								.
Alig confidence																							.																	.																											.
Template Conservation																							.																																												.
Template Sequence		E	V	G	G	G	F	D	A	A	N	Y	K	V	E	R	R	F	A	T	A	P	.	D	Q	T	K	I	P	L	S	V	V	Y	H	K	D	L	D	M	S	Q	P	Q	P	C	M	L	Y	G	Y	G	S	Y	G	L	S	M	D	P	Q	F	S	I	Q	H	.	L	P	Y	C	D	R	G	M	I	F	A	I	A	H
Template Known Secondary structure					T	T			G	G	G											T	.	T												T	T	S		T	T	S												T	T									G	G	G	.					T	T	T
Template Predicted Secondary structure																							.																																												.
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	P	R	G	S	H	V	A	D	A	D	R	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	A	P	W	N	E	H	Y	K	M	Y	D	Y	I	R	N	E	L	P	D	L	V	M	H	H	F	P	A	T	A	K	K	S	I	S	G	H	S	M	G	G	L	G	A	L	V	L	A	L	R	N	P	D
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	G	G	S	E	L	G	R	A	W	Y	E	I	G	A	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	K	R	N	T	F	S	D	F	I	A	A	A	E	F	L	V	N	A	K	L	T	T	P	S	Q	L	A	C	E	G	R	S	A	G	G	L	L	M	G	A	V	L	N	M	R	P	D
Template Known Secondary structure			T	T	S		T	T		T					T	T	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T																	T	T	S			G	G	G							T														G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.														.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																.	.	.	.	.	.																		.	.																						.
Query SS confidence																.	.	.	.	.	.																		.	.																						.
Query Sequence		E	Y	V	S	V	S	A	F	S	P	I	V	S	P	.	.	.	.	.	.	S	Q	V	P	W	G	Q	Q	A	F	A	A	Y	L	A	E	N	.	.	K	D	A	W	L	D	Y	D	P	V	S	L	I	S	Q	G	Q	R	V	A	E	.	I	M	V	D	Q	G	L	S	D	D	F	Y	A	E	Q	L	R	T	P
Query Conservation																.	.	.	.	.	.																		.	.																						.
Alig confidence																.	.	.	.	.	.																		.	.																						.																.
Template Conservation																																																																														.
Template Sequence		L	F	K	V	A	L	A	G	V	P	F	V	D	V	M	T	T	M	C	D	P	S	I	P	L	T	T	G	E	W	E	E	W	G	N	P	N	E	Y	K	Y	Y	D	Y	M	L	S	Y	S	P	M	D	N	V	R	A	Q	E	Y	P	N	I	M	V	Q	C	G	L	H	D	P	R	V	A	Y	W	.	E	P	A
Template Known Secondary structure		G		S						S										T		T	T	S	T	T					T	T	T	T			T	T	S												T	G	G	G			S	S											T	T		S	S	S		T		.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.		.	670	.
		232	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure													.	.	.															.	.	.	.
Query SS confidence													.	.	.															.	.	.	.
Query Sequence		N	L	E	K	I	C	Q	E	M	N	I	.	.	.	K	T	L	I	R	Y	H	E	G	Y	D	H	S	Y	.	.	.	.	Y	F	V	S	S	F	I	G	E	H	I	A	Y	H	A	N	K	L	N
Query Conservation													.	.	.															.	.	.	.
Alig confidence													.	.	.															.	.	.	.
Template Conservation
Template Sequence		K	W	V	S	K	L	R	E	C	K	T	D	N	N	E	I	L	L	N	I	D	M	E	S	G	H	F	S	A	K	D	R	Y	K	F	W	K	E	S	A	I	Q	Q	A	F	V	C	K	H	L	K
Template Known Secondary structure													S										T	T			S	S			S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions