Job Description P51025 Confidence 98.85% Date Thu Jan 5 12:04:51 GMT 2012 Rank 237 Aligned Residues 198 % Identity 13% Template c2pseA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:renilla-luciferin 2-monooxygenase; PDBTitle: crystal structures of the luciferase and green fluorescent2 protein from renilla reniformis Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	Y	W	L	S	G	L	T	C	N	E	Q	N	F	I	T	K	S	G	M	Q	R	Y	A	A	E	H	N	I	I	V	V	A	P	D	T	S	P	R	G	S	H	V	A	D	A	D	R	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	A	P	W	N	E	H	Y	K	M	Y	D	Y	I	R	N
Query Conservation
Alig confidence																		.	.	.										.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.										.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	V	I	F	L	H	G	N	A	T	S	S	Y	L	W	.	.	.	R	H	V	V	P	H	I	E	P	.	V	A	R	C	I	I	P	D	L	I	G	M	G	K	S	G	K	S	G	N	G	S	Y	R	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y
Template Known Secondary structure		S								T	T			G	G	G	G	.	.	.	T	T	T					G	G	.	G	S								T	T	S	T	T					T	T	S			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.										.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																							.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	P	D	L	V	M	H	H	F	P	A	T	A	K	K	S	I	S	G	H	S	M	G	G	L	G	A	L	V	L	A	L	R	N	P	D	E	Y	V	S	V	S	A	F	S	P	I	V	S	P	S	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	L	T	A	W	F	E	L	L	N	L	P	K	K	I	I	F	V	G	H	D	W	G	A	A	L	A	F	H	Y	A	Y	E	H	Q	D	R	I	K	A	I	V	H	M	E	S	V	V	D	V	I	E	S	W	D	E	W	P	D	I	E	E	D	I	A	L	I	K	S	E	E	G	E	K	M	V	L	E	N
Template Known Secondary structure									T	T	T				S	S																			T		T	T	S												S		B	S		S	T	T	S		S										S	T	T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
																																								178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	G	Q	Q	A	F	A	A	Y	L	A	E	N	K	D	A	W	L	D	Y	D	P	V	S	L	I	S	Q	G	Q	R	V	A	E	I	M	V	D	Q	G	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																																																																																	.
Template Sequence		N	F	F	V	E	T	V	L	P	S	K	I	M	R	K	L	E	P	E	E	F	A	A	Y	L	E	P	F	K	E	K	G	E	V	R	R	P	T	L	S	W	P	R	E	I	P	L	V	K	G	G	K	P	D	V	V	Q	I	V	R	N	Y	N	A	Y	L	R	A	S	D	D	L	P	K	L	F	I	E	S	.
Template Known Secondary structure							T					T		S	S												G	G	G		S		S	G	G	G									T			B	T	T	T	S																	T		T	T	S								.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		S	D	D	F	Y	A	E	Q	L	R	T	P	N	L	E	K	I	C	Q	E	M	N	I	K	T	L	I	R	Y	H	E	G	Y	D	H	S	.	.	Y	Y	F	V	S	S	F	I	G	E	H	I	A	Y	H	A	N	K	L	N
Query Conservation																																						.	.
Alig confidence		.								.	.	.	.	.																				.				.	.
Template Conservation		.								.	.	.	.	.																				.
Template Sequence		.	D	P	G	F	F	S	N	.	.	.	.	.	A	I	V	E	G	A	K	K	F	P	N	T	E	F	V	K	V	K	G	.	L	H	F	L	Q	E	D	A	P	D	E	M	G	K	Y	I	K	S	F	V	E	R	V	L	K
Template Known Secondary structure		.				S	S			.	.	.	.	.								T	S	S	S									.	S	S		G	G	G	T	S
Template Predicted Secondary structure		.								.	.	.	.	.																				.
Template SS confidence
			258	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions