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Job DescriptionP51025
Confidence100.00%DateThu Jan 5 12:04:51 GMT 2012
Rank21Aligned Residues241
% Identity11%Templatec2hu7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acylamino-acid-releasing enzyme; PDBTitle: binding of inhibitors by acylaminoacyl peptidase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  GWQNMYRHYSQSLKCEMNVGVYLPPKAANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADA
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Template Sequence  AGSRLVWVESF. DGSRVPTYVLESGRAP. TPGPTVVLVHGGPFAEDSD. SWDTFAASLAAAGFHVVMPNYRGSTGYGEEW
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   331........340. ........350....... ..360.........370...... ...380.........390.........400.......
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  DRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPI
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Template Sequence  RLKIIGD. . . . . . . . . . . . . . PCGGELEDVSAAARWARESG. . LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASV
Template Known Secondary structure  TTTT
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   408.410.... .....420.........430.... .....440.........450.........460.........470.
 
   172.. .....180.........190.........200.........210.........220.........230.........240......
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Query Sequence  VSP. . . . . SQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEMNIKTLI
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Template Sequence  VDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKE. . PLALIHPQNDSRTPLK. PLLRLMGELLARGKTFEA
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   472.......480.........490.........500.........510.... .....520.........530 .........540........
 
   247..250.........260... ......270....
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Query Sequence  RYHEGYDHSYYFVSSFI. . . GEHIAYHANKL
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Template Sequence  HIIPDAGHAINTMEDAVKILLPAVFFLATQR
Template Known Secondary structure  TT

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B
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   549550.........560.........570.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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