Job Description P51025 Confidence 100.00% Date Thu Jan 5 12:04:51 GMT 2012 Rank 18 Aligned Residues 257 % Identity 14% Template c2g5tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: crystal structure of human dipeptidyl peptidase iv (dppiv)2 complexed with cyanopyrrolidine (c5-pro-pro) inhibitor 21ag Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																			.	.
Query SS confidence																																						.																			.	.
Query Sequence		L	I	E	K	H	V	S	F	G	G	W	Q	N	M	Y	R	H	Y	S	Q	S	L	K	C	E	M	N	V	G	V	Y	L	P	P	K	A	.	A	N	E	K	L	P	V	L	Y	W	L	S	G	L	T	C	N	E	.	.	Q	N	F	I	T	K	S	G	M	Q	R	Y	A	A	E	H	N	I	I	V	V	A	P
Query Conservation																																						.																			.	.
Alig confidence																					.																	.																			.	.
Template Conservation																					.
Template Sequence		L	D	K	M	L	Q	N	V	Q	M	P	S	K	K	L	D	F	I	I	.	L	N	E	T	K	F	W	Y	Q	M	I	L	P	P	H	F	D	K	S	K	K	Y	P	L	L	L	D	V	Y	A	G	P	C	S	Q	K	A	D	T	V	F	R	L	N	W	A	T	Y	L	A	S	T	E	N	I	I	V	A	S	F
Template Known Secondary structure							T	T	B												.		T	T											T	T			T	T	S												T	T						S					S								T	T
Template Predicted Secondary structure																					.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	S	P	R	G	S	H	V	A	D	A	D	R	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	A	P	W	N	E	H	Y	K	M	Y	D	Y	I	R	N	E	L	P	D	L	V	M	H	H	F	P	A	T	A	K	K	S	I	S	G	H	S	M	G	G	L	G	A	L	V	L	A	L	R	N	P
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	R	G	S	G	Y	Q	G	D	K	I	M	H	A	I	N	R	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	F	E	V	E	D	Q	I	E	A	A	R	Q	F	S	K	M	G	F	V	D	N	K	R	I	A	I	W	G	W	S	Y	G	G	Y	V	T	S	M	V	L	G	S	G	S
Template Known Secondary structure				T	T		S	S	S						G	G	G	T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S														T	T	S	S	S												T											T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.															.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		D	E	Y	V	S	V	S	A	F	S	P	I	V	S	P	S	Q	V	P	W	G	Q	Q	A	F	A	A	Y	L	A	E	N	K	D	A	W	L	D	Y	D	P	V	S	L	I	S	Q	G	Q	R	V	.	.	A	E	I	M	V	D	Q	G	L	S	D	D	F	Y	A	E	Q	L	R	T	P	N	L	E	K	I	C
Query Conservation																																																					.	.
Alig confidence																																																					.	.																		.
Template Conservation																																																																								.
Template Sequence		G	V	F	K	C	G	I	A	V	A	P	V	S	R	W	E	Y	Y	D	S	V	Y	T	E	R	Y	M	G	L	P	T	P	E	D	N	L	D	H	Y	R	N	S	T	V	M	S	R	A	E	N	F	K	Q	V	E	Y	L	L	I	H	G	T	A	D	D	N	V	H	F	Q	.	Q	S	A	Q	I	S	K	A	L
Template Known Secondary structure					S						S					G	G	G	S	B											S	S	T	T	T	T							T		S	G	G	G	G	G	G	G	G	G	S								T	T		S	S	S				.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.		.	.	.	.	.	720	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		Q	E	M	N	I	K	T	L	I	R	Y	H	E	G	Y	D	H	S	Y	.	.	.	Y	F	V	S	S	F	I	G	E	H	I	A	Y	H	A	N	K	L	N
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		V	D	V	G	V	D	F	Q	A	M	W	Y	T	D	E	D	H	G	I	A	S	S	T	A	H	Q	H	I	Y	T	H	M	S	H	F	I	K	Q	C	F	S
Template Known Secondary structure					T									T	T			T	T			S
Template Predicted Secondary structure
Template SS confidence
		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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