Job Description Q2A0L1 Confidence 100.00% Date Thu Jan 5 12:33:39 GMT 2012 Rank 8 Aligned Residues 179 % Identity 11% Template d1w0ha_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.59

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		S	T	F	L	F	H	D	Y	E	T	F	G	T	H	P	.	.	.	.	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A	F
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																																																											.
Template Conservation																																																																															.
Template Sequence		D	Y	I	C	I	I	D	F	E	A	T	C	E	E	G	N	P	P	E	F	V	H	E	I	I	E	F	P	V	V	L	L	N	T	H	T	L	E	I	E	D	T	F	Q	Q	Y	V	R	P	E	I	N	T	Q	L	S	D	F	C	I	S	L	T	G	I	T	Q	D	Q	V	D	R	A	D	T	F	P	.	Q	V
Template Known Secondary structure		S													T	T			T	T	S														T	T	T		S									B			S	S	S		S																		T	S	B				.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.
		85	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		A	A	R	I	H	S	L	F	.	.	.	.	.	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																																					.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		L	K	K	V	I	D	W	X	K	L	K	E	L	G	T	K	Y	K	Y	S	L	L	T	D	G	S	W	D	X	S	K	F	L	N	I	Q	C	Q	L	S	R	L	K	Y	P	P	F	A	K	.	.	.	.	.	.	.	K	W	I	N	I	R	K	S	Y	G	N	F	Y	K	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T	B	T	T	T	B							S	S	T	T	T	T												T					G	G	G	S	.	.	.	.	.	.	.														T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		G	L	P	S	F	R	L	E	H	L	T	K	A	N	G	I	E	H	.	S	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R	L
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		P	R	S	Q	T	K	L	T	I	X	L	E	K	L	G	X	D	Y	D	G	R	P	H	C	G	L	D	D	S	K	N	I	A	R	I	A	V	R	X	L	Q	D	G	C	E	L
Template Known Secondary structure			G	G	G		S								T	T					S		T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions