Job Description Q2A0L1 Confidence 99.75% Date Thu Jan 5 12:33:39 GMT 2012 Rank 19 Aligned Residues 181 % Identity 14% Template d1uoca_ SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.3

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																									.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																									.	.	.
Query Sequence		Q	Q	S	T	F	L	F	H	D	Y	E	T	F	G	T	H	P	A	L	D	.	.	.	.	.	.	.	.	.	.	.	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	.	.	.	.	.	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	.	.	.	T
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																									.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.															.										.	.	.
Template Conservation																																																																				.
Template Sequence		S	Q	Y	N	H	V	S	I	S	T	E	F	V	G	S	K	V	D	Y	H	Y	Q	T	M	R	A	N	V	D	F	L	N	P	I	Q	L	G	L	S	L	S	D	A	N	G	N	K	P	D	N	G	P	S	T	W	Q	F	N	F	E	F	D	P	K	K	E	.	I	M	S	T	E	S	L	E	L	L	R	K	S
Template Known Secondary structure		T	T	S																										T	T													T	T					S	S	S		S						B				T	T			.													T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																																.	.	.	.	.	.	.	.
Query SS confidence																									.	.																																																.	.	.	.	.	.	.	.
Query Sequence		G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A	F	A	A	R	I	H	S	.	.	L	F	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	.	.	.	.	.	.	.	.
Query Conservation																									.	.																																																.	.	.	.	.	.	.	.
Alig confidence																									.	.															.																									.	.	.	.	.	.			.	.	.	.	.	.	.	.
Template Conservation																																									.																									.	.	.	.	.	.
Template Sequence		G	I	N	F	E	K	H	E	N	L	G	I	D	V	F	E	F	S	Q	L	L	M	D	S	G	L	M	M	D	D	S	V	T	W	I	T	Y	H	A	.	A	Y	D	L	G	F	L	I	N	I	L	M	N	D	S	M	P	N	N	K	E	D	F	E	.	.	.	.	.	.	W	W	V	H	Q	Y	M	P	N	F
Template Known Secondary structure		T											B											T	S	S		S	S		T	T	S					S	S	T	.	T											T	T	S				S	S						.	.	.	.	.	.								S	S
Template Predicted Secondary structure																																									.																									.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L	T	K	A	N	G	I	E	.	H	S	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R	L	F
Query Conservation																																									.
Alig confidence															.	.	.	.	.	.	.	.	.	.																	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	L	N	L	V	Y	K	I	I	Q	E	F	.	.	.	.	.	.	.	.	.	.	K	N	Q	Y	S	L	T	T	L	A	D	E	L	G	L	P	R	F	S	I	F	T	T	T	G	G	Q	S	L	L	M	L	L	S	F	C	Q	L	S	K	L	S	M	H	K	F
Template Known Secondary structure												T	T	T	.	.	.	.	.	.	.	.	.	.					S								T	T					G	G	G	G	S																			T	T	T	B
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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