Job Description Q2A0L1 Confidence 100.00% Date Thu Jan 5 12:33:39 GMT 2012 Rank 6 Aligned Residues 183 % Identity 16% Template c3u6fA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:three prime repair exonuclease 1; PDBTitle: mouse trex1 d200n mutant Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	Q	Q	S	T	F	L	F	H	D	Y	E	T	F	G	T	H	P	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																																																			.	.
Template Sequence		H	G	H	M	Q	T	L	I	F	L	D	L	E	A	T	G	L	P	S	S	R	P	E	V	T	E	L	C	L	L	A	V	H	R	R	A	L	E	N	S	Q	G	H	P	P	P	V	P	R	P	P	R	V	V	D	K	L	S	L	C	I	A	P	G	K	.	.	A	C	S	P	G	A	S	E	I	T	G	L	S
Template Known Secondary structure						S										S	S		G	G	G																						S	S	S								S	S											S	S	.	.											S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		P	Q	E	A	R	A	K	G	E	N	E	.	.	.	.	.	A	A	F	A	A	R	I	H	S	L	F	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.													.																																			.	.	.	.	.	.	.
Template Conservation																														.																																			.	.	.	.	.	.	.
Template Sequence		K	A	E	L	E	V	Q	G	R	Q	R	F	D	D	N	L	A	I	L	L	R	A	F	L	Q	R	Q	P	.	Q	P	C	C	L	V	A	H	N	G	D	R	Y	D	F	P	L	L	Q	T	E	L	A	R	L	S	T	P	S	P	L	D	G	T	.	.	.	.	.	.	.	F	C	V	D	S	I	A	A	L	K
Template Known Secondary structure								T	T				S														T	S		.	S	S						T	T	T	T	T	T											T		S	S			S		T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																														.																																			.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L	T	K	A	N	.	G	I	E	H	S	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R	L	F	D	Y
Query Conservation																														.
Alig confidence							.	.	.	.	.	.	.	.	.	.														.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	E	Q	A	.	.	.	.	.	.	.	.	.	.	R	K	S	Y	S	L	G	S	I	Y	T	R	L	Y	W	Q	A	P	T	D	S	H	T	A	E	G	N	V	L	T	L	L	S	I	C	Q	W	K	P	Q	A	L	L	Q	W	V	D	E
Template Known Secondary structure					T		.	.	.	.	.	.	.	.	.	.					S										S	S			S		S	S	S													T	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.											.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions