Job Description Q2A0L1 Confidence 97.16% Date Thu Jan 5 12:33:39 GMT 2012 Rank 51 Aligned Residues 204 % Identity 14% Template c3f2cA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:geobacillus kaustophilus dna polc; PDBTitle: dna polymerase polc from geobacillus kaustophilus complex with dna,2 dgtp and mn Resolution 2.50 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	H	V	S	G	M	F	G	A	W	R	G	N	T	S	W	V	A	P	L	A	W	H	P	E	N	R	N	A	V	I	M	V	D	L	A	G	D	I	S	P	L	L	E	L	D	S	D	T	L	R	E	R	L	Y	T	A	K	T	D	L	G	D	N	A	A	V	P	V	K	L	V	H	I	N	K	C	P	V
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.
Template Sequence		T	L	L	A	Q	N	E	T	G	L	K	N	L	F	K	L	V	S	L	S	H	I	Q	Y	F	H	R	V	P	R	I	P	R	S	V	L	V	K	H	R	D	G	L	L	V	G	S	G	C	D	.	.	.	.	.	.	.	.	K	G	E	L	F	D	N	V	E	D	I	A	R	F	Y	D	F	L	E	V	H	P
Template Known Secondary structure							S																T	T	T		S	S	S											T		T	T							S	T	.	.	.	.	.	.	.	.	T	B	T	T	T	T								T		S	B
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.									.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	A	N	T	L	R	P	E	D	A	D	R	L	G	I	N	R	Q	H	C	L	D	N	L	K	I	L	R	E	N	P	Q	V	R	E	K	V	V	A	I	F	A	E	A	E	P	F	T	P	S	D	N	V	D	A	Q	L	Y	N	G	F	F	S	D	A	D	R	A	A	M	K	I	V	L	E	T	E	P
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.
Template Sequence		P	D	V	Y	K	P	L	V	K	D	E	.	.	.	.	.	.	.	.	.	.	.	E	M	I	K	N	I	I	R	S	I	V	A	L	G	E	K	L	.	D	I	P	V	V	A	T	G	N	V	H	Y	L	N	P	E	D	K	I	Y	.	.	.	.	.	.	.	.	R	K	I	L	I	H	S	Q	G	G	A	N
Template Known Secondary structure		G	G	G	G								.	.	.	.	.	.	.	.	.	.	.																	T	.	T									B	S	B	S	S	G	G	G				.	.	.	.	.	.	.	.							T	T	G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.
Template SS confidence
		702	.	.	.	.	.	.	.	710	.	.												.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.									750	.	.	.	.	.	.	.	.	.	760	.
						389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.								.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		.	.	.	.	R	N	L	P	A	L	D	I	T	F	V	D	K	R	I	E	K	L	.	.	.	.	.	.	.	L	F	N	Y	R	A	R	N	F	P	G	T	L	D	Y	A	E	Q	Q	R	W	L	E	H	R	R	Q	V	F	T	P	E	F	L	Q	G	Y	A	D	E	L	Q	M	L	V	Q	Q	Y	A	D	D
Query Conservation		.	.	.	.																			.	.	.	.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.									.	.	.																																					.	.	.	.
Template Conservation																																							.	.	.																																					.	.	.	.
Template Sequence		P	L	N	R	H	E	L	P	D	V	Y	F	R	T	T	N	E	M	L	D	C	F	S	F	L	G	P	E	K	A	K	E	I	V	V	D	N	.	.	.	T	Q	K	I	A	S	L	I	G	D	V	K	P	I	K	D	E	L	Y	T	P	R	I	E	G	A	D	E	E	I	R	E	M	S	Y	R	.	.	.	.
Template Known Secondary structure		S	S	S	S	S						B											T	G	G	G										T			.	.	.							T						S	S		S	S		B					T	T												.	.	.	.
Template Predicted Secondary structure																																							.	.	.																																					.	.	.	.
Template SS confidence
		767	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.				.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	K	V	A	L	L	K	A	L	W	Q	Y	A	E	E	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	A	K	E	I	Y	G	D	P	L
Template Known Secondary structure		.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									840	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions