Job Description Q2A0L1 Confidence 5.73% Date Thu Jan 5 12:33:39 GMT 2012 Rank 70 Aligned Residues 124 % Identity 9% Template c3e0dA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase iii subunit alpha; PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit Resolution 4.60 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		L	V	H	V	S	G	M	F	G	A	W	R	G	N	T	S	W	V	A	P	L	A	W	H	P	E	N	R	N	A	V	I	M	V	D	L	A	G	D	I	S	P	L	L	.	.	.	E	L	D	S	D	T	L	R	E	R	L	Y	T	A	K	T	D	L	G	D	N	A	A	V	P	V	K	L	V	H	I	N	K
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	L	A	K	D	F	T	G	Y	Q	N	L	V	R	L	A	S	R	A	Y	L	E	G	F	Y	E	K	P	R	I	D	R	E	I	L	R	E	H	A	Q	G	L	I	A	L	S	G	C	L	G	A	E	I	P	Q	F	I	L	Q	D	R	L	D	L	A	E	A	R	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S																	T		B	S	S	S	B										T		T	T							S	T	T	B								T	T									.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	V	L	A	Q	A	N	T	L	R	P	E	D	A	D	R	L	G	I	N	R	Q	H	C	L	D	N	L	K	I	L	R	E	N	P	Q	V	R	E	K	V	V	A	I	F	A	E	A	E	P	F	T	P	S	D	N	V	D	A	Q	L	Y
Query Conservation
Alig confidence		.	.	.														.																										.
Template Conservation		.	.	.														.																										.
Template Sequence		.	.	.	L	N	E	D	L	S	I	F	G	D	R	F	F	.	I	E	I	Q	N	H	G	L	P	E	Q	K	K	V	N	Q	V	L	K	E	F	A	R	K	Y	.	G	L	G	M	V	A	T	N	N	G	H	Y	V	R	K	E	D	A	R	A
Template Known Secondary structure		.	.	.									G	G	G			.						S	S																		T	.	T									B	S	B	S	S	G	G	G
Template Predicted Secondary structure		.	.	.														.																										.
Template SS confidence
					166	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions