Job Description Q2A0L1 Confidence 100.00% Date Thu Jan 5 12:33:39 GMT 2012 Rank 12 Aligned Residues 166 % Identity 20% Template c2p1jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima Resolution 2.50 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	L	F	H	D	Y	E	T	F	G	T	H	P	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A	F	A	A	R	I	H
Query Conservation
Alig confidence																																.	.															.	.																				.
Template Conservation																																.	.															.	.																				.
Template Sequence		T	F	V	V	L	D	F	E	T	T	G	L	D	P	Q	V	D	E	I	I	E	I	G	A	V	K	I	Q	G	G	.	.	Q	I	V	D	E	Y	H	T	L	I	K	P	S	R	.	.	E	I	S	R	K	S	S	E	I	T	G	I	T	Q	E	M	L	E	N	.	K	R	S	I	E	E	V	L	P	E	F	L
Template Known Secondary structure											S	S	S		T	T	T													T	T	.	.													S	S	.	.																		T	T	.
Template Predicted Secondary structure																																.	.															.	.																				.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L
Query Conservation
Alig confidence					.	.										.																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.										.																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	L	.	.	E	D	S	I	I	V	A	H	N	.	A	N	F	D	Y	R	F	L	R	L	W	I	K	K	V	M	G	L	D	W	E	R	P	Y	.	.	.	.	.	.	.	.	.	I	D	T	L	A	L	A	K	S	L	L	K	.	.	.	.	.	.	.	.	.	.	.	L	R	S	Y	S	L	D	S	V
Template Known Secondary structure					.	.	S	S						T	T	.																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure					.	.										.																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		432	.	.			.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.										.	.	470	.	.	.	.	.	.	.	.	.												480	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	N	G	I	E	H	S	N	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	K	L	G	L	G	P	F	R	H	H	R	A	L	D	D	A	R	V	T	A	Q	V	F	L	R	F	V	E	M	M	K	K
Template Known Secondary structure						T							S																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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