Job Description Q2A0L1 Confidence 98.02% Date Thu Jan 5 12:33:39 GMT 2012 Rank 45 Aligned Residues 150 % Identity 19% Template c1q8iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna polymerase ii; PDBTitle: crystal structure of escherichia coli dna polymerase ii Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.										.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	T	F	L	F	H	D	Y	E	T	F	G	T	.	.	.	.	.	.	.	.	.	H	P	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																			.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	K	W	V	S	I	D	I	E	T	T	R	H	G	E	L	Y	C	I	G	L	E	G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	S	.	.	.	S	L	D	F	E	L	E	Y	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	S										T	T								S	S			S			T	.	.	.	T		S	S						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.												.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.
Predicted Secondary structure																		.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence																		.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		E	N	E	A	A	F	A	A	R	I	H	S	L	F	T	V	.	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	.	.	.	.	.	.	.	.	.	.	.	Y	A	W	S	W	Q	H	D	N	S	R	W	D	.	.	.	.	.	L	L	D	V	M
Query Conservation																		.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence		.																.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation		.
Template Sequence		.	S	R	P	Q	L	L	E	K	L	N	A	W	F	A	N	Y	D	P	D	V	I	I	G	W	N	V	V	Q	F	D	L	R	M	L	Q	K	H	A	E	R	Y	R	L	P	L	R	L	G	R	D	N	S	E	L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I
Template Known Secondary structure		.	S																		S					S	S	T	T	T	T												T	T						S	S	S	S										S	S	S							B	T	T	B
Template Predicted Secondary structure		.
Template SS confidence
			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.											180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H	L	T	K	A	N	G	I	E	H	S	N	.	.	.	.	.	.	.	.	.	.	A	H	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V
Query Conservation																																								.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	L	K	S	A	F	W	N	.	.	.	.	.	.	.	.	.	.	F	S	S	F	S	L	E	T	V	A	Q	E	L	L	M	D	E	I	D	R	R	F	A	E	D	K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H	K	T
Template Known Secondary structure							S				.	.	.	.	.	.	.	.	.	.		S										T	T			T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.											.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions