Job Description P38135 Confidence 100.00% Date Thu Jan 5 11:58:04 GMT 2012 Rank 3 Aligned Residues 520 % Identity 22% Template d1ry2a_ SCOP info Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Resolution 2.30

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																									.
Query SS confidence																						.	.	.	.	.																									.
Query Sequence		S	L	A	D	Y	W	Q	Q	T	A	R	A	M	P	D	K	I	A	V	V	.	.	.	.	.	D	N	H	G	A	S	Y	T	Y	S	A	L	D	H	A	A	S	C	L	A	N	W	M	L	.	A	K	G	I	E	S	G	D	R	I	A	F	Q	L	P	G	W	C	E	F	T	V	I	Y	L	A	C	L	K	I
Query Conservation																						.	.	.	.	.																									.
Alig confidence																						.	.	.	.	.																									.
Template Conservation
Template Sequence		A	C	Y	N	C	V	D	R	H	A	L	K	T	P	N	K	K	A	I	I	F	E	G	D	E	P	G	Q	G	Y	S	I	T	Y	K	E	L	L	E	E	V	C	Q	V	A	Q	V	L	T	Y	S	M	G	V	R	K	G	D	T	V	A	V	Y	M	P	M	V	P	E	A	I	I	T	L	L	A	I	S	R	I
Template Known Secondary structure							T					T	T		T	T	S								S	S	T	T																								T	S				T	T									S	S													T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	V	S	V	P	L	L	P	S	W	R	E	A	E	L	V	W	V	L	N	K	C	Q	A	K	M	F	F	A	P	T	L	F	K	Q	T	R	P	V	D	L	I	L	P	L	Q	N	Q	.	.	.	.	.	.	.	.	.	.	L	P	Q	L	Q	Q	I	V	G	V	D	K	L	A	P	A	T	S	S	L	S
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	I	H	S	V	V	F	A	G	F	S	S	N	S	L	R	D	R	I	N	D	G	D	S	K	V	V	I	T	T	D	E	S	N	R	G	G	K	V	I	E	T	K	R	I	V	D	D	A	L	R	E	T	P	G	V	R	H	V	L	V	Y	R	K	T	N	N	P	S	V	A	F	H	A	P	R	D	L	D
Template Known Secondary structure		T								T	T	S													T		S						S	B			B	T	T	B			B									T	T	S		T	T									S	S			S	S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	S	Q	I	I	A	D	N	T	S	L	T	T	A	I	T	T	H	G	D	E	L	A	A	V	L	F	T	S	G	T	E	G	L	P	K	G	V	M	L	T	H	N	N	I	L	A	S	E	.	R	A	Y	C	A	R	L	N	L	T	W	Q	D	V	F	M	M	P	A	P	L	G	H	A	T	G	F	L	H	G
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		W	A	T	E	K	K	K	Y	K	T	Y	Y	P	C	T	P	V	D	S	E	D	P	L	F	L	L	Y	T	S	G	S	T	G	A	P	K	G	V	Q	H	S	T	A	G	Y	L	L	G	A	L	L	T	M	R	Y	T	F	D	T	H	Q	E	D	V	F	F	T	A	G	D	I	G	W	I	T	G	H	T	Y	V
Template Known Secondary structure							T	T	S		S									T	T	S										S	S	S	S								S															S				S	S							S		T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																	.	.	.	.																																		.	.
Query SS confidence																	.	.	.	.																																		.	.
Query Sequence		V	T	A	P	F	L	I	G	A	R	S	V	L	L	D	.	.	.	.	I	F	T	P	D	A	C	L	A	L	L	E	Q	Q	R	C	T	C	M	L	G	A	T	P	F	V	Y	D	L	L	N	V	L	.	.	E	K	Q	P	A	D	L	S	A	L	R	F	F	L	C	G	G	T	T	I	P	K	K	V	A	R
Query Conservation																	.	.	.	.																																		.	.
Alig confidence																	.	.	.	.																																		.	.
Template Conservation
Template Sequence		V	Y	G	P	L	L	Y	G	C	A	T	L	V	F	E	G	T	P	A	Y	P	N	Y	S	R	Y	W	D	I	I	D	E	H	K	V	T	Q	F	Y	V	A	P	T	A	L	R	L	L	K	R	A	G	D	S	Y	I	E	N	H	S	L	K	S	L	R	C	L	G	S	V	G	E	P	I	A	A	E	V	W	E
Template Known Secondary structure		T							T	S							S		T	T	S	S		T	T									T	T		S													T	T	S		T	T	S	S	S	S				T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		322	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.
Predicted Secondary structure							.	.	.	.																									.																									.	.																	.	.
Query SS confidence							.	.	.	.																									.																									.	.																	.	.
Query Sequence		E	C	Q	Q	R	.	.	.	.	G	I	K	L	L	S	V	Y	G	S	T	E	S	S	P	H	A	V	V	N	L	D	D	P	.	L	S	R	F	M	H	T	D	G	Y	A	A	A	G	V	E	I	K	V	V	D	D	A	R	.	.	K	T	L	P	P	G	C	E	G	E	E	A	S	R	G	P	.	.	N	V
Query Conservation							.	.	.	.																									.																									.	.																	.	.
Alig confidence							.	.	.	.																									.																									.	.																	.	.
Template Conservation
Template Sequence		W	Y	S	E	K	I	G	K	N	E	I	P	I	V	D	T	Y	W	Q	T	E	S	G	S	H	L	V	T	P	L	A	G	G	V	T	P	M	K	P	G	S	A	S	F	P	F	F	G	I	D	A	V	V	L	D	P	N	T	G	E	E	L	N	T	S	H	A	E	G	V	L	A	V	K	A	A	W	P	S	F
Template Known Secondary structure						T	T	S		S	S	S						B			T	T	T		S		S					T	T	T						T	T							T	T								S	S	S	T	T					S	S								S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		F	M	G	Y	F	D	E	P	E	L	T	A	R	A	L	.	.	D	E	E	G	W	Y	Y	S	G	D	L	C	R	M	D	E	A	G	Y	I	K	I	T	G	R	K	K	D	I	I	V	R	G	G	E	N	I	S	S	R	E	V	E	D	I	L	L	Q	H	P	K	I	H	D	A	C	V	V	A	M	S	D	E
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		A	R	T	I	W	K	N	H	D	R	Y	L	D	T	Y	L	N	P	Y	P	G	Y	Y	F	T	G	D	G	A	A	K	D	K	D	G	Y	I	W	I	L	G	R	V	D	D	V	V	N	V	S	G	H	R	L	S	T	A	E	I	E	A	A	I	I	E	D	P	I	V	A	E	C	A	V	V	G	F	N	D	D
Template Known Secondary structure						T	T										T	S	S	S	T	T	S											T	T							S		T	T	S		B		S	S	S			B											S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		R	L	G	E	R	S	C	A	Y	V	V	L	K	A	P	H	H	S	L	S	L	E	E	V	V	A	F	F	S	R	K	R	V	A	K	Y	K	Y	P	E	H	I	V	V	I	E	K	L	P	R	T	T	S	G	K	I	Q	K	F	L	L	R	K	D	I	M	R	R	L	T	Q	.	D	V	C	E	E	I	E
Query Conservation																																																																									.
Alig confidence																	.	.	.	.																																																					.
Template Conservation																	.	.	.	.
Template Sequence		L	T	G	Q	A	V	A	A	F	V	V	L	K	L	Q	.	.	.	.	D	I	K	K	H	L	V	F	T	V	R	K	D	I	G	P	F	A	A	P	K	L	I	I	L	V	D	D	L	P	K	T	R	S	G	K	I	M	R	R	I	L	R	K	I	L	A	N	P	G	I	V	R	H	L	I	D	S	V	K
Template Known Secondary structure		T	T	S													.	.	.	.	S													T		T	T	T	S		S						S				B		T	T	S		B								S													T	T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.					.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.