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Job DescriptionP38135
Confidence100.00%DateThu Jan 5 11:58:04 GMT 2012
Rank16Aligned Residues482
% Identity20%Templatec3iteB_
PDB info PDB header:ligaseChain: B: PDB Molecule:sidn siderophore synthetase; PDBTitle: the third adenylation domain of the fungal sidn non-2 ribosomal peptide synthetase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40........ .50.........60.........70.........80.........90.........
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Query Sequence  ASLADYWQQTARAMPDKIAVVDNHG. . . . ASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIG
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Template Sequence  VPPSHYIETWAKTHPEWKAVEVATGFIVTEDWTYKKLNETANQVANLIIHASL. HGRAIAVSLDRSLIAFAIIVGIXKSG
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TT
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   15....20.........30.........40.........50.........60....... ..70.........80.........90...
 
   100.........110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  AVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNTSL
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Template Sequence  NTYVPIEAGLPNDRKSFLLRDSRAAXAFVCDNNFDGVELP. . . . . . . . . . . . . . . . . PETKVLDTKNQSFIENLSTQDTS
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TTS
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   99100.........110.........120.........130........ .140.........150.........160.
 
   180.........190.........200.........210.........220 .........230.........240.........250.
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Query Sequence  TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAY. . . . . . . . CARLNLTWQDVFMMPAPLGHATGFLHGVTAP
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Template Sequence  DILNNYPENLDAYLLYTSG. . GTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEXFLAW
Template Known Secondary structure 






TTS

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GGGGG
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   162.......170.........180 .........190.........200.........210.........220.........230.........
 
   252.......260.........270.........280.........290.........300.........310.........320..... ....330
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Query Sequence  FLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKVARECQQ. RGIKL
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Template Sequence  RFGLCAVTGERLSXLDDLPRTFRELGVTHAGIVPSLLDQTGLVPED. . . . APHLVYLGVGGEKXTPRTQQIWSSSDRVAL
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TTT


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   242.......250.........260.........270.........280....... ..290.........300.........310.......
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  LSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEE
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Template Sequence  VNVYGPTEVTIGCSAGRILPDSDTRCIGHPLGDSVAHVLAPGSNEHVKKGXAGELVIEGSLVANGYLNRPDAKGFCDING
Template Known Secondary structure 

GGG
S
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TTS
TT
TT

TTSS
B

TTSSTTS
SSS
TT


TT
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   318.320.........330.........340.........350.........360.........370.........380.........390.......
 
   411. .......420.........430.........440.........450.........460.........470.........480.........
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Query Sequence  GW. YYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHSL
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Template Sequence  RKXYRTGDIVRXDADSSILFLGRKDEQV. . . KQRLELGEVSEVIRSLSPTDIDVVTLLLFLVSFVASSGAAVRGELRNYK
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TTS





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   398.400.........410.........420..... ....430.........440.........450.........460.........470....
 
   490.........500.........510......... 520.........530..
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Query Sequence  SLEEVVAFFSRKRVAKYKYPEHIVVIEKLP. RTTSGKIQKFLLR
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Template Sequence  EINNSLRQACEQTLPAYXVPDFIIPISFIPLRDTSAKTDAKALE
Template Known Secondary structure  TTS
GGGS
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B
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   490.........500.........510.........520.........530...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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