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Job DescriptionP38135
Confidence99.50%DateThu Jan 5 11:58:04 GMT 2012
Rank33Aligned Residues235
% Identity17%Templatec3hguB_
PDB info PDB header:biosynthetic proteinChain: B: PDB Molecule:ehpf; PDBTitle: structure of phenazine antibiotic biosynthesis protein
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220..... ....230.........240.........250.........260.
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Query Sequence  THGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLN. . . LTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLL
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Template Sequence  VPQGLPADSHPQVYESGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSI
Template Known Secondary structure  S
TTS
TT






TSTTTSSTT




S

TT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   262 .......270.........280.........290.........300.........310.........
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Query Sequence  D. . . . . . . . . . . . . . . . . . . . . . IFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKV
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Template Sequence  DIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNLDE
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S

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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   320...... ...330.........340.........350.........360.........370. ........380.........390.....
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Query Sequence  ARECQQR. . . GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD. DARKTLPPGCEGEEASRGPNVFMG
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Template Sequence  IKFIASEILPDCEFSASYGSTSALGVSRSLLITSESQQV. IYDSFSPFITYDVVDSITAQTVEYGERGNVIVTHLSPWAF
Template Known Secondary structure  T
TT
GGGT



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B

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   245....250.........260.........270.........280... ......290.........300.........310.........320...
 
   396...400.........410.........420
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Query Sequence  YFDEPELTARALDEEGWYYSGDLCR
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Template Sequence  YPRVAERDTAIRLPGVSGFAGDRLA
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SS
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   324.....330.........340........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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