Job Description P38135 Confidence 18.91% Date Thu Jan 5 11:58:04 GMT 2012 Rank 88 Aligned Residues 72 % Identity 19% Template c2qjlA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ubiquitin-related modifier 1; PDBTitle: crystal structure of urm1 Resolution 1.44 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	T	L	T	F	N	E	Q	R	R	A	A	Y	R	Q	Q	G	.	.	.	.	.	.	.	L	W	G	D	A	S	L	A	D	Y	W	Q	Q	T	A	R	A	M	P	D	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	V	D	N	H	G	A	S	Y	T	Y	S	A	L	D	H
Query Conservation																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																																																																.	.
Template Sequence		V	N	V	K	V	E	F	L	G	G	L	D	A	I	F	G	K	Q	R	V	H	K	I	K	M	D	K	E	D	P	V	T	V	G	D	L	I	D	H	I	V	S	T	M	I	N	N	P	N	D	V	S	I	F	I	E	D	D	S	I	R	P	G	I	I	T	L	I	N	D	T	D	W	E	L	E	G	E	.	.
Template Known Secondary structure										T	T	G	G	G	G	T	T	T										S		S			B												T		S	S	G	G	G							T	T				T	T						T	T			G	G	G	G	T	G	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	C	L	A	N	W	M	L	A	K	G	I	E	S	G	D	R	I	A	F	Q	L	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	D	Y	I	L	E	D	G	D	I	I	S	F	T	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	G	G		B			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions