Return to main results Retrieve Phyre Job Id

Job DescriptionP09833
Confidence100.00%DateThu Jan 5 11:02:30 GMT 2012
Rank17Aligned Residues218
% Identity31%Templated1v43a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.. .....10..... ....20.........30.........40.........50.........60.........70........
Predicted Secondary structure  .

..



























Query SS confidence 


.










. .






























































Query Sequence  LEL. NFSQTLGNHCL. . TINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRV
Query Conservation 
 
.
  
  
   
.. 


 
  

   
 
 








  
 
      
 
   
                
 
Alig confidence 


.










..




















































......



Template Conservation 
    
        

  

  
  


  
 
 








  
 
      
 
   
  
      ......    
Template Sequence  VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK. . . . . . DRNI
Template Known Secondary structure  TT
TT


TTSSTSS

STT
TTS
GG......GGT
Template Predicted Secondary structure 

























......


Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70.........80.. ....
 
   7980.........90.........100. ........110.........120.........130.........140.........150....
Predicted Secondary structure 






....












Query SS confidence 






















. . . .




















































Query Sequence  GYVFQDARLFPHYKVRGNLRYGM. . . . SKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDE
Query Conservation    
 
   
    

 


    ....                
          

 
  


 




   
 





Alig confidence 





......










....




















































Template Conservation    
   ...... 

 
 
                        
          

 
  


 

 

   
 





Template Sequence  SMVFQH. . . . . . MTVYENIAFPLKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDE
Template Known Secondary structure 

......

TT




TT
GGGTTS
TTT

SS
TT

SS
Template Predicted Secondary structure 

......

























Template SS confidence 















































































   87..90.. .......100.........110.........120.........130.........140.........150.........160
 
   155....160.........170.........180.........190.........200.........210.........220.........230.
Predicted Secondary structure 
























Query SS confidence 












































































Query Sequence  PLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQ
Query Conservation 

  

      
   
       
 


 


         
 
 

  
 
   
    
               
Alig confidence 












































































Template Conservation 

 


      
   
  
      


  

         
 
 

  
 
   
   

            
 
Template Sequence  PLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGA
Template Known Secondary structure  TTTTS
T
S

STT


SSS

Template Predicted Secondary structure 






















Template SS confidence 












































































   169170.........180.........190.........200.........210.........220.........230.........240.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions