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Job DescriptionP09833
Confidence97.16%DateThu Jan 5 11:02:30 GMT 2012
Rank167Aligned Residues109
% Identity22%Templatec3cf1C_
PDB info PDB header:transport proteinChain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
Resolution4.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  LPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYG
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Template Sequence  MTPSKGVLFYGPPGCGKTLLAKAIAN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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S


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   508.510.........520.........530...
 
   101........110.........120.........130.........140.........150..... ....160.......
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Query Sequence  MSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEP. . . . . . . . . . . . . LASLDIPRKREL
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Template Sequence  . . . . . . . ECQANFISIKGPELLTMWFGESEANVREIFDKARQ. . AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQI
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TTT
TTTTTTT..T
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SSGGGGTTTT
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   534.....540.........550.........560........ .570.........580.........590.........600....
 
   168.170.........180.........190..
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Query Sequence  LPYLQRLTREINIPMLYVSHSLDEI
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Template Sequence  LTEMDGMSTKKNVFIIGATNRPDII
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GGG
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   605....610.........620.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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