Job Description P09833 Confidence 100.00% Date Thu Jan 5 11:02:30 GMT 2012 Rank 8 Aligned Residues 328 % Identity 28% Template c1z47B_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius Resolution 1.90 Å

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		2	.	.		.	.	.	.	.	10		.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure					.							.						.	.
Query SS confidence					.							.						.	.
Query Sequence		L	E	L	.	N	F	S	Q	T	L	.	G	N	H	C	L	.	.	T	I	N	E	T	L	P	A	N	G	I	T	A	I	F	G	V	S	G	A	G	K	T	S	L	I	N	A	I	S	G	L	T	R	P	Q	K	G	R	I	V	L	N	G	R	V	L	N	D	A	E	K	G	I	C	L	T	P	E	K	R	R
Query Conservation					.							.						.	.
Alig confidence					.							.						.	.																																																						.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		I	E	F	V	G	V	E	K	I	Y	P	G	G	A	R	S	V	R	G	V	S	F	Q	I	R	E	G	E	M	V	G	L	L	G	P	S	G	S	G	K	T	T	I	L	R	L	I	A	G	L	E	R	P	T	K	G	D	V	W	I	G	G	K	R	V	T	D	L	P	P	Q	.	.	.	.	.	.	K	R	N
Template Known Secondary structure												T	T	S	T	T											T	T								S	T	T	S	S										T	S	S			S							T	T				T	T			G	G	.	.	.	.	.	.	G	S	S
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		V	G	Y	V	F	Q	D	A	R	L	F	P	H	Y	K	V	R	G	N	L	R	Y	G	M	.	.	.	.	.	.	S	K	S	M	V	D	Q	F	D	K	L	V	A	L	L	G	I	E	P	L	L	D	R	L	P	G	S	L	S	G	G	E	K	Q	R	V	A	I	G	R	A	L	L	T	A	P	E	L	L	L
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	L	V	F	Q	N	Y	A	L	F	Q	H	M	T	V	Y	D	N	V	S	F	G	L	R	E	K	R	V	P	K	D	E	M	D	A	R	V	R	E	L	L	R	F	M	R	L	E	S	Y	A	N	R	F	P	H	E	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	A	P	R	P	Q	V	L	L
Template Known Secondary structure							T	T					T	T	S								T	T	G	G	G	T	T																	T	T		G	G	G	T	T	S		G	G	G	S															T	T			S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	P	L	A	S	L	D	I	P	R	K	R	E	L	L	P	Y	L	Q	R	L	T	R	E	I	N	I	P	M	L	Y	V	S	H	S	L	D	E	I	L	H	L	A	D	R	V	M	V	L	E	N	G	Q	V	K	A	F	G	A	L	E	E	V	W	G	S	S	V	M	N	P	W	L	P	K	E	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	E	P	F	A	A	I	D	T	Q	I	R	R	E	L	R	T	F	V	R	Q	V	H	D	E	M	G	V	T	S	V	F	V	T	H	D	Q	E	E	A	L	E	V	A	D	R	V	L	V	L	H	E	G	N	V	E	Q	F	G	T	P	E	E	V	Y	E	K	P	G	T	L	F	V	A	S	F	I	G	E
Template Known Secondary structure				S	T	T	T	T	S																												S										S							T	T														S		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	L	K	V	T	V	L	E	H	H	P	H	Y	A	M	T	A	L	A	L	G	D	Q	H	L	W	V	N	K	L	D	E	P	L	Q	A	A	L	R	I	R	I	Q	A	S	D	V	S	L	V	L	Q	P	P	Q	Q	T	S	I	R	N	V	L	R	A	K	V	V	N	S	Y	D	D	N	G	Q	V	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		S	N	V	W	T	R	A	V	Q	N	G	R	I	E	V	A	G	A	A	L	P	V	D	P	A	.	.	.	.	.	.	.	.	V	S	E	G	S	E	V	A	V	V	V	R	P	K	D	V	E	L	Q	P	A	S	E	R	E	.	.	.	.	.	.	A	H	A	Q	V	V	R	S	A	F	K	G	S	Y	S	A
Template Known Secondary structure										B	T	T				S	S	S							T	T	.	.	.	.	.	.	.	.	S		T	T									G	G	G								T	T	T	.	.	.	.	.	.		S										S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.									.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	E	V	G	G	K	T	L	W	A	R	I	S	P	W	A	R	D	E	L	A	I	K	P	G	L	W	L	Y	A	Q	I	K	S	V	S	I
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		C	W	I	R	T	K	D	G	E	V	W	.	E	V	H	V	P	S	A	D	R	H	R	W	S	P	G	A	W	V	H	M	N	V	T	R	W	F	I
Template Known Secondary structure							T	T	S				.						G	G	G	T	T	T			T	T
Template Predicted Secondary structure													.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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