Job Description P09833 Confidence 96.76% Date Thu Jan 5 11:02:30 GMT 2012 Rank 212 Aligned Residues 145 % Identity 21% Template c1udxA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:the gtp-binding protein obg; PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8 Resolution 2.07 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.												.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		T	I	N	E	T	L	P	A	N	G	I	T	A	I	F	G	V	S	G	A	G	K	T	S	L	I	N	A	I	S	G	.	.	.	.	.	.	.	.	.	.	.	L	T	R	P	Q	K	G	R	I	V	L	.	N	G	R	V	L	N	D	A	E	K	G	I	C	L	T	P	E	K	R	R	V	G	Y	V	F	Q
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.												.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	R	L	E	L	M	L	I	A	D	V	G	L	V	G	Y	P	N	A	G	K	S	S	L	L	A	A	M	T	R	A	H	P	K	I	A	P	Y	P	F	T	T	L	S	P	N	L	G	V	V	E	V	S	E	E	E	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	A	D
Template Known Secondary structure										S		S							G	G	G											S	S								T	T		S	S										S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																		.	.	210	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	R	L	F	P	H	Y	K	V	R	G	N	L	R	Y	G	M	S	K	S	M	V	D	Q	F	D	K	L	V	A	L	L	G	I	E	P	L	L	D	R	L	P	G	S	L	S	G	G	E	K	Q	R	V	A	I	G	R	A	L	L	T	A	P	E	L	L	L	L	D	E	P	L	A	S	L	D	I	P	R
Query Conservation
Alig confidence																		.	.	.	.																																																		.	.	.	.
Template Conservation																		.	.	.	.																																																		.	.	.	.
Template Sequence		I	P	G	I	I	E	G	A	S	E	G	K	G	L	G	L	.	.	.	.	E	F	L	R	H	I	A	R	T	R	V	L	L	Y	V	L	D	A	A	D	E	P	L	K	T	L	E	T	L	R	K	E	V	G	A	Y	D	P	A	L	L	R	R	P	S	L	V	A	L	.	.	.	.	N	K	V	D	L	L	E
Template Known Secondary structure									G	G	G	S			S			.	.	.	.							T	S	S	S								T	T	S																							S							.	.	.	.				T	T	S
Template Predicted Secondary structure																		.	.	.	.																																																		.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	E	L	L	P	Y	L	Q	R	L	T	R	E	I	N	I	P	M	L	Y	V	S
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		E	E	A	V	K	A	L	A	D	A	L	A	R	E	.	G	L	A	V	L	P	V	S
Template Known Secondary structure														T	T	.	T	S
Template Predicted Secondary structure																.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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