 |
Job Description | P37909 | Confidence | 1.75% | Date | Thu Jan 5 11:57:47 GMT 2012 |
Rank | 36 | Aligned Residues | 74 |
% Identity | 15% | Template | d2dwya1 |
SCOP info | Immunoglobulin-like beta-sandwich
| Clathrin adaptor appendage domain
| gamma-adaptin C-terminal appendage domain-like
|
Resolution | 2.30 |
|
 |
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | V | T | F | D | S | T | A | K | T | T | G | A | T | P | L | L | S | N | T | S | A | G | E | A | T | G | V | G | V | R | L | M | D | K | N | D | G | N | I | V | L | G | S | A | . |
. |
. |
. |
. |
. |
A | P | D | L | D | L | D | A | S | S | S | E | Q | T | L | N | F | F | A | W | M | E | Q | I | D | N | A | V |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |
|
|   | . | . | . |
|
|
|
|   |   |
|
|   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |
|
|   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |
|   |
Template Sequence |   |
V | V | V | S | M | L | S | T | A | P | Q | P | I | R | N | I | V | F | Q | S | . |
. |
. |
A | V | P | K | V | M | K | V | K | L | Q | P | P | S | G | T | E | L | P | A | F | N | P | I | V | H | P | S | A | I | T | Q | V | L | L | L | A | N | P | Q | K | E | K | V | R | L | R | Y | K | L | T | F | T | M | G | D | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| S | S |
| B |  |  |  |  |  |  |  | . | . | . |  |
|
| T | T | S | B |
|
| B |
|
|
| S |
| S |
| B |
|
|
|
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |
| T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
543 | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | |
|
|
. | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . |
  |
  |   |
171 | . | . |
Predicted Secondary structure |   |
|  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
D | V | T |
Query Conservation |   |
  |
|
|
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
T | Y | N |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
620 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|