Job Description P37909 Confidence 99.93% Date Thu Jan 5 11:57:47 GMT 2012 Rank 5 Aligned Residues 156 % Identity 32% Template c2jtyA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:type-1 fimbrial protein, a chain; PDBTitle: self-complemented variant of fima, the main subunit of type 1 pilus Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		Y	A	A	D	E	G	S	G	E	I	H	F	K	G	E	V	I	E	A	P	C	E	I	H	P	E	D	I	D	K	N	I	D	L	G	Q	V	T	T	T	H	I	N	R	.	E	H	H	S	N	K	V	A	V	D	I	R	L	I	N	C	D	L	P	A	S	D	N	G	S	G	M	P	V	S	K	V	G	V	T
Query Conservation																																														.
Alig confidence																																														.																						.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		A	A	T	T	V	N	G	G	T	V	H	F	K	G	E	V	V	N	A	A	C	A	V	D	A	G	S	V	D	Q	T	V	Q	L	G	Q	V	R	T	A	S	L	A	Q	E	G	A	T	S	S	A	V	G	F	N	I	Q	L	N	D	C	D	T	N	V	A	.	.	.	.	.	.	.	.	S	K	A	A	V	A
Template Known Secondary structure							S	S	S	S					S	S					S	S																		G	G	G		S	S						S													T	T	T		.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		F	D	S	T	A	K	T	T	G	A	T	P	L	L	S	N	T	.	.	S	A	G	E	A	T	G	V	G	V	R	L	M	D	K	N	D	G	N	I	V	L	G	S	A	A	P	D	L	D	L	D	A	S	S	S	E	Q	T	L	N	F	F	A	W	M	E	Q	I	D	N	A	V	D	V	T	A	G	E	V	T
Query Conservation																			.	.
Alig confidence																			.	.																																																		.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		F	L	G	T	A	I	D	A	G	H	T	N	V	L	A	L	Q	S	S	A	A	G	S	A	T	N	V	G	V	Q	I	L	D	R	T	G	A	A	L	T	L	D	G	A	T	F	S	S	E	T	T	L	N	N	G	T	N	T	I	P	F	Q	A	R	Y	F	A	T	.	.	.	G	A	A	T	P	G	A	A	N
Template Known Secondary structure						B	S	S	G	G	G	T	T	S	B				S		T	T	T	S		S	S								T	T	S		B			B	T	S											S															.	.	.	S	S				S
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	A	T	Y	V	L	D	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	A	T	F	K	V	Q	Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions