Job Description P16701 Confidence 2.07% Date Thu Jan 5 11:35:47 GMT 2012 Rank 56 Aligned Residues 85 % Identity 8% Template c2oarA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl) Resolution 3.50 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		V	L	P	E	L	S	P	A	L	V	A	G	V	A	L	S	F	T	R	S	L	G	E	F	G	A	V	I	F	I	A	.	.	G	N	I	A	W	K	T	E	V	T	S	L	M	I	F	V	R	L	Q	E	F	D	Y	P	A	A	S	A	I	A	S	V	I	L	A	A	S	L	L	L	L	F	S	I	N	T	L
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		I	V	D	L	A	V	A	V	V	I	G	T	A	F	T	A	L	V	T	K	F	T	D	S	I	I	T	P	L	I	N	R	I	G	V	N	A	Q	S	D	V	G	I	L	R	I	G	I	G	G	G	Q	T	I	D	L	N	V	L	L	S	A	A	I	N	F	F	L	I	A	F	A	V	Y	F	L	V	V	L	P
Template Known Secondary structure																																														T	T	T			S																											T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		267	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	R	F	G	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	T	L	R	K	K
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions