 |
Job Description | P0A9E5 | Confidence | 55.62% | Date | Thu Jan 5 11:10:00 GMT 2012 |
Rank | 413 | Aligned Residues | 40 |
% Identity | 18% | Template | d1xmka1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Z-DNA binding domain
|
Resolution | 0.97 |
|
  |   |
199 | 200 | . | . | . | . | . | . | . | . | |
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
|
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  | . | . | . |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | G | N | Y | L | G | L | T | V | . |
E | T | I | S | R | L | L | G | R | F | Q | K | S | G | M | L | A | V | K | G | K | Y | . |
. |
. |
I | T | I | E | N | N | D | A |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|
| . |   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   | . | . | . |
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |
|   |
|   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |
|
Template Sequence |   |
N | L | A | K | N | I | G | L | T | K | A | R | D | I | N | A | V | L | I | D | M | E | R | Q | G | D | V | Y | R | Q | G | T | T | P | P | I | W | H | L | T | D | K | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S | S | S |
|  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|