 |
Job Description | P0A9E5 | Confidence | 99.32% | Date | Thu Jan 5 11:10:00 GMT 2012 |
Rank | 48 | Aligned Residues | 118 |
% Identity | 12% | Template | d1vp6a_ |
SCOP info | Double-stranded beta-helix
| cAMP-binding domain-like
| cAMP-binding domain
|
Resolution | 1.70 |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | Q | L | C | I | P | F | T | L | N | E | H | E | L | D | Q | L | D | N | I | I | E | R | K | K | P | I | Q | K | G | Q | T | L | F | K | A | G | D | E | L | K | S | L | Y | A | I | R | S | G | T | I | K | S | Y | T | I | T | E | Q | G | D | E | Q | I | T | G | F | H | L | A | G | D | L | V | G | F | D | A | I |
Query Conservation |   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | A | A | V | P | L | F | Q | K | L | G | P | A | V | L | V | E | I | V | R | A | L | . |
R | A | R | T | V | P | A | G | A | V | I | C | R | I | G | E | P | G | D | R | M | F | F | V | V | E | G | S | V | S | V | A | T | P | N | P | V | E | L | . |
. |
. |
. |
. |
. |
. |
G | P | G | A | F | F | G | E | M | A | L |
Template Known Secondary structure |   |
 | T | T |
| G | G | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |
| . |  |  |  |  |  |
| T | T |
|  |  |  |
| T | T | S |
|
|
|  |  |  |  |  |  |  | S |
|  |  |  |
| S | S | S |
|  |  |  | . | . | . | . | . | . | . |
| T | T |
|  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
. | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . |
  |
  |   |
105 | |
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
| . |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | . |
S | G | H | H | P | S | F | A | Q | A | L | E | T | S | M | V | C | E | I | P | F | E | T | L | D | D | L | S | G | K | M | P | N | L | R | Q | Q | M | M | R | L | M | S | G | E |
Query Conservation |   |
  | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
I | S | G | E | P | R | S | A | T | V | S | A | A | T | T | V | S | L | L | S | L | H | S | A | D | F | Q | M | L | C | S | S | S | P | E | I | A | E | I | F | R | K | T | A | L | E | R |
Template Known Secondary structure |   |
 |  |
|
|
|
| S | S |
|  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|