Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9E5
Confidence75.54%DateThu Jan 5 11:10:00 GMT 2012
Rank295Aligned Residues35
% Identity17%Templated1sd4a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.... .....210.........220........
Predicted Secondary structure 


....






Query SS confidence 










. . . .























Query Sequence  TMTRGDIGNYL. . . . GLTVETISRLLGRFQKSGMLAVKG
Query Conservation   

   

  
....
 

 



 
  
   


    
Alig confidence 










....























Template Conservation    
  

   
        


 
 
 

  

 
 
  
Template Sequence  SVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYK
Template Known Secondary structure  STTS


TTS
Template Predicted Secondary structure 











Template SS confidence 






































   24.....30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions