Job Description P0A9E5 Confidence 99.49% Date Thu Jan 5 11:10:00 GMT 2012 Rank 26 Aligned Residues 122 % Identity 17% Template c3mdpA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:cyclic nucleotide-binding domain (cnmp-bd) protein; PDBTitle: crystal structure of a putative cyclic nucleotide-binding protein2 (gmet_1532) from geobacter metallireducens gs-15 at 1.90 a resolution Resolution 1.90 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	Q	L	C	I	P	F	T	L	N	E	H	E	L	D	Q	L	D	N	I	I	E	R	K	K	P	I	Q	K	G	Q	T	L	F	K	A	G	D	E	L	K	S	L	Y	A	I	R	S	G	T	I	K	S	Y	T	I	T	E	Q	G	D	E	Q	I	T	G	F	H	L	A	G	D	L	V	G	F	D	A	I
Query Conservation
Alig confidence																								.																																	.	.	.	.	.	.
Template Conservation																								.																																	.	.	.	.	.	.
Template Sequence		L	R	V	Y	R	F	F	A	S	L	T	D	E	Q	L	K	D	I	A	L	I	S	.	E	E	K	S	F	P	T	G	S	V	I	F	K	E	N	S	K	A	D	N	L	X	L	L	L	E	G	G	V	E	L	F	.	.	.	.	.	.	Y	S	S	T	V	C	S	V	V	P	G	A	I	F	G	V	S	S	L
Template Known Secondary structure		G	G	G	S					T	S											T		.							T	T						T	T	S	B										S						.	.	.	.	.	.										T	T					G	G	G	S
Template Predicted Secondary structure																								.																																	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		105		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	S	G	H	H	P	S	F	A	Q	A	L	E	T	S	M	V	C	E	I	P	F	E	T	L	D	D	L	S	G	K	M	P	N	L	R	Q	Q	M	M	R	L	M	S	G	E	I	K	G
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		I	K	P	Y	H	Y	T	S	S	A	R	A	T	K	P	V	R	V	V	D	I	N	G	A	R	L	R	E	X	S	E	N	N	Q	A	L	G	Q	V	L	X	N	N	V	A	A	A	V	L	A
Template Known Secondary structure		S	T	T		B		S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions