 |
Job Description | P0A9E5 | Confidence | 54.01% | Date | Thu Jan 5 11:10:00 GMT 2012 |
Rank | 420 | Aligned Residues | 28 |
% Identity | 11% | Template | c3k7aM_ |
PDB info |
PDB header:transcription | Chain: M: PDB Molecule:transcription initiation factor iib; |
PDBTitle: crystal structure of an rna polymerase ii-tfiib complex
|
Resolution | 3.80 Å |
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | M | T | R | G | D | I | G | N | Y | L | G | L | T | V | E | T | I | S | R | L | L | G | R | F | Q | K |
Query Conservation |   |
  |   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |
Template Sequence |   |
V | A | R | T | F | K | E | I | Q | S | L | I | H | V | K | T | K | E | F | G | K | T | L | N | I | M | K | N |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  |  |  | S | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|