Job Description P0A9E5 Confidence 75.90% Date Thu Jan 5 11:10:00 GMT 2012 Rank 293 Aligned Residues 145 % Identity 5% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	K	S	L	Y	A	I	R	S	G	T	I	K	S	Y	T	I	T	E	Q	G	D	E	Q	I	T	G	F	H	L	A	G	D	L	V	G	F	D	A	I	G	S	G	H	H	P	S	F	A	Q	A	L	E	T	S	M	V	C	E	I	P	F	E	T	L	D	D	L	S	G	K	M	P	N	L	R	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	S	S	I	I	L	L	K	K	N	S	I	Q	R	F	S	L	T	S	L	S	D	E	N	I	N	V	S	V	I	T	I	S	D	S	F	I	R	S	L	K	S	Y	I	L	G	N	K	D	L	L	L	W	N	C	E	H	N	D	I	A	V	L	S	E	V	V	N	G	F	R	E	I	N	Y	S	D	E	F
Template Known Secondary structure			T	T							T	T												S	S																																		S	S										T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	R	L	M	S	G	E	I	K	G	D	Q	D	M	I	L	L	L	S	K	K	N	A	E	E	R	L	A	A	F	I	Y	N	L	S	R	R	F	A	Q	R	G	F	S	P	R	E	F	R	L	T	M	T	R	G	D	I	G	N	Y	L	G	L	T	V	E	T	I	S	R	L	L	G	R
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	V	F	F	S	G	F	F	S	K	V	E	K	K	Y	N	S	I	F	I	T	D	D	L	D	A	M	E	K	I	S	C	L	V	K	S	D	I	T	R	N	.	.	.	.	.	.	.	.	.	.	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	S
Template Known Secondary structure														T	T	T	S	S	S		S	S			T	T													T	T	T	S		.	.	.	.	.	.	.	.	.	.											T												T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.											.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions