Phyre 2 alignment of P0A9E5 with c3fmsA

Job Description P0A9E5
Confidence 95.68% Date Thu Jan 5 11:10:00 GMT 2012

Rank 137 Aligned Residues 65

% Identity 8% Template c3fmsA_

PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator

Resolution 2.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence	N	A	E	E	R	L	A	A	F	I	Y	N	L	S	R	R	F	A	Q	R	G	F	S	P	R	E	F	R	L	T	M	T	R	G	D	I	G	N	Y	L	G	L	T	V	E	T	I	S	R	L	L	G	R	F	Q	K	S	G	M	L	A	V	K	G	K	.	Y	I	T	I	E	N
Query Conservation																																																																		.
Alig confidence																									.	.	.	.	.	.																																				.
Template Conservation																									.	.	.	.	.	.
Template Sequence	L	V	R	T	K	V	Y	N	L	L	K	E	X	I	L	N	H	E	L	K	L	G	E	K	.	.	.	.	.	.	L	N	V	R	E	L	S	E	K	L	G	I	S	F	T	P	V	R	D	A	L	L	Q	L	A	T	E	G	L	V	K	V	V	P	R	V	G	F	F	V	T	D
Template Known Secondary structure																T	T	S	S		T	T		B	.	.	.	.	.	.											T																	T	S					T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
	8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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