Job Description P0A9E5 Confidence 99.98% Date Thu Jan 5 11:10:00 GMT 2012 Rank 2 Aligned Residues 209 % Identity 16% Template c1zybA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator, crp family; PDBTitle: crystal structure of transcription regulator from bacteroides2 thetaiotaomicron vpi-5482 at 2.15 a resolution Resolution 2.15 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		I	S	Q	L	C	I	P	F	T	L	N	E	H	E	L	D	Q	L	D	N	I	I	E	.	R	K	K	P	I	Q	K	G	Q	T	L	F	K	A	G	D	E	L	K	S	L	Y	A	I	R	S	G	T	I	K	S	Y	T	I	T	E	Q	G	D	E	Q	I	T	G	F	H	L	A	G	D	L	V	G	F	D	A
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		L	L	Q	L	P	L	F	Q	G	L	C	H	E	D	F	T	S	I	L	D	K	V	K	L	H	F	I	K	H	K	A	G	E	T	I	I	K	S	G	N	P	C	T	Q	L	C	F	L	L	K	G	E	I	S	I	V	T	N	A	K	E	N	I	Y	T	V	I	E	Q	I	E	A	P	Y	L	I	E	P	Q	S
Template Known Secondary structure		G	G	G	S	G	G	G	T	T												T	S									T	T						T	T	S	B										S									G	G	G	S									S	S					G	G	G
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		104	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		I	G	S	.	.	G	H	H	P	S	F	A	Q	A	L	E	T	S	M	V	C	E	I	P	F	E	T	L	D	D	L	S	G	K	M	P	N	L	R	Q	Q	M	M	R	L	M	S	G	E	I	K	G	D	Q	D	M	I	L	L	L	S	K	K	N	A	E	E	R	L	A	A	F	I	Y	N	L	S	R	R	F
Query Conservation					.	.
Alig confidence					.	.																																																																							.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	F	G	X	N	T	N	Y	A	S	S	Y	V	A	H	T	E	V	H	T	V	C	I	S	K	A	F	V	L	S	D	L	F	R	Y	D	I	F	R	L	N	Y	X	N	I	V	S	N	R	A	Q	N	L	Y	S	R	L	W	D	E	P	T	L	D	L	K	S	K	I	I	R	F	F	L	S	.	.	.	.	.
Template Known Secondary structure		G	S	S	S			B		S	S					S	S															T	G	G	G	S																						T	T	S					S											T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	R	G	F	S	P	R	E	F	R	L	T	M	T	R	G	D	I	G	N	Y	L	G	L	T	V	E	T	I	S	R	L	L	G	R	F	Q	K	S	G	M	L	A	V	K	G	K	Y	I	T	I	E	N	N	D	A	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	H	C	E	K	P	Q	G	E	K	T	F	K	V	K	X	D	D	L	A	R	C	L	D	D	T	R	L	N	I	S	K	T	L	N	E	L	Q	D	N	G	L	I	E	L	H	R	K	E	I	L	I	P	D	A	Q	K	L
Template Known Secondary structure		.	T		S	S	S	S	S																T	S															T	T	S					T	T					S		G	G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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