Job Description P0A9E5 Confidence 99.95% Date Thu Jan 5 11:10:00 GMT 2012 Rank 16 Aligned Residues 207 % Identity 16% Template c1ft9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:carbon monoxide oxidation system transcription PDBTitle: structure of the reduced (feii) co-sensing protein from r.2 rubrum Resolution 2.60 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	C	I	P	F	T	L	N	E	H	E	L	D	Q	L	D	N	I	I	E	R	K	K	P	I	Q	K	G	Q	T	L	F	K	A	G	D	E	L	K	S	L	Y	A	I	R	S	G	T	I	K	S	Y	T	I	T	E	Q	G	D	E	Q	I	T	G	F	H	L	A	G	D	L	V	G	F	D	A	I	G	S
Query Conservation
Alig confidence																						.																																																						.	.	.	.	.	.
Template Conservation																						.																																																						.	.	.	.	.	.
Template Sequence		R	F	N	I	A	N	V	L	L	S	P	D	G	E	T	F	F	R	G	F	.	R	S	K	I	H	A	K	G	S	L	V	C	T	G	E	G	D	E	N	G	V	F	V	V	V	D	G	R	L	R	V	Y	L	V	G	E	E	R	E	I	S	L	F	Y	L	T	S	G	D	M	F	C	M	.	.	.	.	.	.
Template Known Secondary structure					T					T	S	T	T	T	T	T	T	T	T	T		.							T	T						T	T												S									T	T										T	T					S	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																																						.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	H	P	S	F	A	Q	A	L	E	T	S	M	V	C	E	I	P	F	E	T	L	D	D	L	S	G	K	M	P	N	L	R	Q	Q	M	M	R	L	M	S	G	E	I	K	G	D	Q	D	M	I	L	L	L	S	K	K	N	A	E	E	R	L	A	A	F	I	Y	N	L	S	R	R	F	A	Q	R	G	F
Query Conservation
Alig confidence		.																																																																								.	.
Template Conservation		.																																																																								.	.
Template Sequence		.	H	S	G	C	L	V	E	A	T	E	R	T	E	V	R	F	A	D	I	R	T	F	E	Q	K	L	Q	T	C	P	S	M	A	W	G	L	I	A	I	L	G	R	A	L	T	S	C	M	R	T	I	E	D	L	M	F	H	D	I	K	Q	R	I	A	G	F	F	I	D	H	A	.	.	N	T	T	G	R	Q
Template Known Secondary structure		.		S	S						S	S																				G	G	G																								T														T		.	.	B				S
Template Predicted Secondary structure		.																																																																								.	.
Template SS confidence
			77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		S	P	R	E	F	R	L	T	M	T	R	G	D	I	G	N	Y	L	G	L	T	V	E	T	I	S	R	L	L	G	R	F	Q	K	S	G	M	L	A	V	K	.	G	K	Y	I	T	I	E	N	N	D	A	L	A	Q	L	A
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		T	G	V	I	V	S	V	D	F	T	V	E	E	I	A	N	L	I	G	S	S	R	Q	T	T	S	T	A	L	N	S	L	I	K	E	G	Y	I	S	R	Q	G	R	G	H	Y	T	I	P	N	L	V	R	L	K	A	A	A
Template Known Secondary structure																					S															T	T	S	S				S	T	T					S	S							T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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