 |
Job Description | P0AE39 | Confidence | 99.90% | Date | Thu Jan 5 11:22:27 GMT 2012 |
Rank | 61 | Aligned Residues | 117 |
% Identity | 25% | Template | d1zgza1 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 1.80 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | V | I | I | V | E | D | E | F | L | A | Q | Q | E | L | S | W | L | I | K | E | H | S | Q | M | E | I | V | G | T | F | D | D | G | L | D | V | L | K | F | L | Q | H | N | R | V | D | A | I | F | L | D | I | N | I | P | S | L | D | G | V | L | L | A | Q | N | I | S | Q | F | A | H | K | P | F | I | V | F | I |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   | . | . |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   | . |   |   |   |   |
|
|
|   |
Template Sequence |   |
H | H | I | V | I | V | E | D | E | P | V | T | Q | A | R | L | Q | S | Y | F | T | Q | E | G | Y | . |
. |
T | V | S | V | T | A | S | G | A | G | L | R | E | I | X | Q | N | Q | S | V | D | L | I | L | L | D | I | N | L | P | D | E | N | G | L | X | L | T | R | A | L | R | E | R | . |
S | T | V | G | I | I | L | V |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | S |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | . |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . |
  |
  |   |
81 | . | |
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |
| . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | . |
. |
W | K | E | H | A | V | E | A | F | E | L | E | A | F | D | Y | I | L | K | P | Y | Q | E | S | R | I | T | G | M | L | Q | K | L | E | A | A | W | Q |
Query Conservation |   |
|   | . | . |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
Template Sequence |   |
T | G | R | S | D | R | I | D | R | I | V | G | L | E | X | G | A | D | D | Y | V | T | K | P | L | E | L | R | E | L | V | V | R | V | K | N | L | L | W | R | I | D |
Template Known Secondary structure |   |
 | S | S |
|
|  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|