Job Description P0AE39 Confidence 46.17% Date Thu Jan 5 11:22:27 GMT 2012 Rank 170 Aligned Residues 95 % Identity 11% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	I	V	E	D	E	F	L	A	Q	Q	E	L	S	W	L	I	K	E	H	S	Q	M	E	I	V	G	T	F	D	D	G	L	D	V	L	K	F	L	Q	H	N	R	V	D	A	I	F	L	D	I	N	I	P	S	L	D	G	V	L	L	A	Q	N	I	S	Q	F	A	H	K	P	F	I	V	F	I	T
Query Conservation
Alig confidence																		.	.	.	.																																			.
Template Conservation																		.	.	.	.																																			.
Template Sequence		G	V	V	I	I	N	K	D	R	E	L	C	E	E	F	A	.	.	.	.	K	K	L	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A	E	V	S	K	N	D	V	V	V	I	L	T	P	.	R	D	E	V	N	L	F	I	A	Q	L	V	M	K	D	F	G	V	K	R	V	V	S	L	V
Template Known Secondary structure								S										.	.	.	.			S	S	S					S		T	T	S								T			T	T								S	.															T	S
Template Predicted Secondary structure																		.	.	.	.																																			.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	K	E	H	A	V	E	A	F	E	L	E	A	F	D	Y	I	L	K	P
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		N	D	P	G	N	M	E	I	F	K	K	M	G	I	.	T	T	V	L	N	L
Template Known Secondary structure			S	G	G	G								T		.
Template Predicted Secondary structure																.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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