 |
Job Description | P0AE39 | Confidence | 24.36% | Date | Thu Jan 5 11:22:27 GMT 2012 |
Rank | 231 | Aligned Residues | 60 |
% Identity | 17% | Template | c3c6kC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:spermine synthase; |
PDBTitle: crystal structure of human spermine synthase in complex2 with spermidine and 5-methylthioadenosine
|
Resolution | 1.95 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
K | V | I | I | V | E | D | E | F | L | A | Q | Q | E | L | S | W | L | I | K | E | H | S | Q | M | . |
. |
. |
E | I | V | G | T | F | D | D | G | L | D | V | L | K | F | L | . |
. |
Q | H | N | R | V | D | A | I | F | L | D | I | N | I | . |
P | S | L | D | G |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   | . | . | . |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   | . | . |   |   |   |   |   |
|
|
|
|
|
|
|   |
| . |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |   |   |   |
Template Sequence |   |
M | V | T | M | V | E | I | D | Q | M | V | I | D | G | C | K | K | Y | M | R | K | L | D | N | L | K | G | D | C | Y | Q | V | L | I | E | D | C | I | P | V | L | K | R | Y | A | K | E | G | R | E | F | D | Y | V | I | N | D | L | T | A | V | P | I | S | T | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| S | S | B |
| S | S |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
|
| S | S |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|