Job Description P0AE39 Confidence 99.35% Date Thu Jan 5 11:22:27 GMT 2012 Rank 118 Aligned Residues 100 % Identity 24% Template c3bs1A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:accessory gene regulator protein a; PDBTitle: structure of the staphylococcus aureus agra lyttr domain2 bound to dna reveals a beta fold with a novel mode of3 binding Resolution 1.60 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		T	R	E	N	D	T	I	N	L	V	K	D	E	R	I	I	V	T	P	I	N	D	I	Y	Y	A	E	A	H	E	.	.	K	M	T	F	V	Y	T	R	R	E	S	Y	V	M	P	M	N	I	T	E	F	C	S	K	L	P	P	S	H	F	F	R	C	H	R	S	F	C	V	N	L	N	K	I	R	E	I	E
Query Conservation																																.	.
Alig confidence																																.	.																												.	.
Template Conservation																																																													.	.
Template Sequence		D	N	S	V	E	T	I	E	L	K	R	G	S	N	S	V	Y	V	Q	Y	D	D	I	M	F	F	E	S	S	T	K	S	H	R	L	I	A	H	L	D	N	R	Q	I	E	F	Y	G	N	L	K	E	L	S	Q	L	D	D	R	.	.	F	F	R	C	H	N	S	F	V	V	N	R	H	N	I	E	S	I	D
Template Known Secondary structure				S	S								T	T							G	G	G								S	S	T	T							S	S																	T	T	.	.						T	T					G	G	G
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	F	N	N	T	Y	I	L	R	L	K	D	L	D	F	E	V	P	V	S	R	S	K	V	K	E	F
Query Conservation
Alig confidence						.	.	.							.
Template Conservation						.	.	.							.
Template Sequence		S	K	E	R	.	.	.	I	V	Y	F	K	N	.	K	E	H	C	Y	A	S	V	R	N	V	K	K	I
Template Known Secondary structure		T	T	T	T	.	.	.					T	T	.	S							T	T	T	G	G	G
Template Predicted Secondary structure						.	.	.							.
Template SS confidence
		215	.	.	.				.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions