Job Description P0AE39 Confidence 99.90% Date Thu Jan 5 11:22:27 GMT 2012 Rank 70 Aligned Residues 215 % Identity 13% Template c2hqrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	I	I	V	E	D	E	F	L	A	Q	Q	E	L	S	W	L	I	K	E	H	S	Q	M	E	I	V	G	T	F	D	D	G	L	D	V	L	K	F	L	Q	H	N	R	V	D	A	I	F	L	D	I	N	I	P	S	L	D	G	V	L	L	A	Q	N	I	S	Q	F	A	H	K	P	F	I	V	F	I
Query Conservation
Alig confidence																												.	.																								.	.	.	.
Template Conservation																												.	.																								.	.	.	.
Template Sequence		M	R	V	L	L	I	E	K	N	S	V	L	G	G	E	I	E	K	G	L	N	V	K	G	F	M	.	.	A	D	V	T	E	S	L	E	D	G	E	Y	L	M	D	I	R	N	Y	D	L	V	M	.	.	.	.	V	S	D	K	N	A	L	S	F	V	S	R	I	K	E	K	H	S	S	I	V	V	L	V	S
Template Known Secondary structure									S													G	G	G	T			.	.					S	S									T	T	S			S				.	.	.	.				T	T													T	T	S
Template Predicted Secondary structure																												.	.																								.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		81	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		T	A	W	.	.	K	E	H	A	V	E	A	F	E	L	E	A	F	D	Y	I	L	K	P	Y	Q	E	S	R	I	T	G	M	L	Q	K	L	E	A	A	W	Q	Q	Q	Q	T	S	S	T	P	A	A	T	V	T	R	E	N	D	T	I	N	L	V	K	D	E	R	I	I	V	T	P	I	N	D	I	Y	Y	A
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		S	D	N	P	T	S	E	E	E	V	H	A	F	E	Q	G	A	D	D	Y	I	A	K	P	Y	R	S	I	K	A	L	V	A	R	I	E	A	R	L	R	F	W	G	S	N	V	I	E	I	G	D	L	T	I	S	P	D	E	E	K	I	I	Y	K	G	R	E	V	E	V	K	G	K	P	F	E	V	L	T	H
Template Known Secondary structure			S	S													T		S					T	T		S		T											T	S	S					S				T	T					T	T	T	T					T	T							S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		E	A	H	E	K	M	T	F	V	Y	T	R	R	E	S	Y	V	M	P	M	N	I	T	E	F	C	S	K	L	P	P	S	H	F	F	R	C	H	R	S	F	C	V	N	L	N	K	I	.	R	E	I	E	P	W	F	N	N	T	Y	I	L	R	L	K	D	L	D	F	E	V	P	V	S	R
Query Conservation																																																		.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	R	H	R	D	Q	I	V	S	.	.	.	.	.	.	.	.	.	.	.	K	E	Q	L	L	D	A	I	W	E	E	P	E	M	V	T	P	N	V	I	E	V	A	I	N	Q	I	R	Q	K	M	D	K	P	L	G	I	S	T	V	E	T	V	R	R	R	G	Y	R	F	C	Y	P	K
Template Known Secondary structure					T		S					.	.	.	.	.	.	.	.	.	.	.											S	S		S		G	G	G	T														T	T	S	S	S							S	S	S								G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.												.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions