Job Description P0AE39 Confidence 99.91% Date Thu Jan 5 11:22:27 GMT 2012 Rank 55 Aligned Residues 149 % Identity 18% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	I	I	V	E	D	E	F	L	A	Q	Q	E	L	S	W	L	I	K	E	H	S	Q	M	E	I	V	G	T	F	D	D	G	L	D	V	L	K	F	L	Q	H	N	R	V	D	A	I	F	L	D	I	N	I	P	S	L	D	G	V	L	L	A	Q	N	I	S	Q	F	A	H	K	P	F	I	V	F	I
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		V	R	V	L	V	V	E	D	E	R	D	L	A	D	L	I	T	E	A	L	K	K	E	X	F	.	.	T	V	D	V	C	Y	D	G	E	E	G	X	Y	X	A	L	N	E	P	F	D	V	V	I	L	D	I	X	L	P	V	H	D	G	W	E	I	L	K	S	X	R	E	S	G	V	N	T	P	V	L	X	L
Template Known Secondary structure									S	S														T	T		.	.						S	S											S			S						S			S	S	S												T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		T	A	W	K	E	H	A	.	.	V	E	A	F	E	L	E	A	F	D	Y	I	L	K	P	Y	Q	E	S	R	I	T	G	M	L	Q	K	L	E	A	A	W	Q	Q	Q	Q	T	S	S	T	P	A	A	T	V	T	R	E	N	D	T	I	N	L	V	K	D	E	R	I	I	V	T	P
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		T	A	L	S	D	V	E	Y	R	V	K	G	L	N	X	G	A	D	D	Y	L	P	K	P	F	D	L	R	E	L	I	A	R	V	R	A	L	I	R	R	K	S	E	S	K	S	T	K	L	V	C	G	D	L	I	L	D	T	A	T	K	K	A	Y	R	G	S	K	E	I	D	L	T
Template Known Secondary structure			S	S									T						S					S	S																				S		S	S					T	T					T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions