|   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | |
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. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
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. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
 |  |  |  |  |
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|
|  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
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|
| . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
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|
| . |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
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. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
A | V | G | F | D | I | D | D | T | V | L | F | S | . |
. |
. |
. |
. |
. |
. |
S | P | G | F | W | R | G | K | K | T | F | S | P | E | S | E | D | Y | . |
. |
. |
. |
. |
. |
. |
. |
L | K | N | P | V | F | W | E | K | M | N | N | G | W | . |
. |
. |
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. |
. |
. |
. |
. |
. |
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. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
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| . | . | . | . | . | . | . |
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|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . |
|   |
|   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
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| . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
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|   |
|
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|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | Y | L | L | D | I | E | G | T | V | C | P | I | S | F | V | K | E | T | L | F | P | Y | F | T | N | K | V | P | Q | L | V | Q | Q | D | T | R | D | S | P | V | S | N | I | L | S | Q | F | H | I | D | N | K | E | Q | L | Q | A | H | I | L | E | L | V | A | K | D | V | K | D | P | I | L | K | Q | L | Q | G | Y | V |
Template Known Secondary structure |   |
 |  |  |  |
|
| B | T | T | T | B |
| T |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T | S |  |  |  |  |  |  |  | T | T |
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
  |   |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
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. | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  | . | . | . | . | . | . | . | . | . |
|
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|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
. |
. |
. |
. |
. |
. |
D | E | F | S | I | P | K | E | V | A | R | Q | L | I | D | M | H | V | R | R | G | D | A | I | F | F | V | T | G | R | S | P | T | K | T | E | T | V | S | K | T | L | A | D | N | F | H | I | P | A | T | N | M | N | P | V | I | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | D | K | P | G | Q |
Query Conservation |   |
. | . | . | . | . | . |   |
|   |
|
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|
|   |   |
|   |
|
|   |   |   |
|   |   |
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|   |
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|   |   |   |   |   |   |   |
|   |
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|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
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|
| . | . |
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|
| . | . | . | . | . | . | . | . | . |
|
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
Template Sequence |   |
W | A | H | G | Y | E | S | G | Q | I | K | A | P | . |
. |
V | Y | A | D | A | I | D | F | I | K | R | K | K | R | V | F | I | Y | S | S | G | S | V | K | A | Q | K | L | L | F | G | Y | V | Q | D | P | N | A | P | A | H | D | S | L | D | L | N | S | Y | I | D | G | Y | F | D | I | N | T | S | G | K | K | T | E | T |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | S |
|
| B |
| . | . |
|
|  |  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  | S | B |
|
| T | T |
| T | T | S |
|
| B |
|
| G | G | G |
|
|  |  |  |
|  |  |  |  |
|
| T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
| . | . |
|
|
|
|  |  |  |  |  |  |
|
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|
|  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |
|
|
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|
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|
|  |  |  |  |  |
|
|
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|
|
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|  |
Template SS confidence |   |
|
|
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|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
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|
|
|
|
|
|
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|
|
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|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
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|
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|
|
| . |
. |
. |
. |
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Query Sequence |   |
N | T | K | S | Q | W | L | Q | D | K | N | I | . |
. |
. |
. |
R | I | F | Y | G | D | S | D | N | D | I | T | A | A | R | D | V | G | A | R | G | I | R | I | L | R | A | S | N | S | T | Y | K | P | L | P | Q | A | G | A | F | G | E | E | V | I | V | N | S | E |
Query Conservation |   |
  |   |
|   |   |   |   |
|
|
|   |
| . | . | . | . |
|
|   |   |
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |
|
|
|   |
Alig confidence |   |
|
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|
| . | . | . | . |
|
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| . | . | . |
|
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|
| . | . |
|
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|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|   |
| . | . | . |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |
|   |
Template Sequence |   |
Q | S | Y | A | N | I | L | R | D | I | G | A | K | A | S | E | V | L | F | L | S | D | N | P | L | E | L | D | A | A | A | G | V | G | I | A | T | G | L | A | S | R | P | G | . |
. |
. |
N | A | P | V | P | D | G | Q | K | Y | . |
. |
Q | V | Y | K | N | F | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |
|
| T | T | . | . | . | S |
|
|
|
| S | S |
|
| S | . | . |
|  |  | S |
| S | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |
|
|
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|
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|
|
| . | . |
|
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|  |  |
Template SS confidence |   |
|
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|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
. | . | . | . | . | . | . | 230 | . | . | |
|
. | . | . | . | . | . | . |
  |