 |
Job Description | P0AE22 | Confidence | 47.99% | Date | Thu Jan 5 11:22:16 GMT 2012 |
Rank | 157 | Aligned Residues | 96 |
% Identity | 6% | Template | c3nzoB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; |
PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri.
|
Resolution | 2.10 Å |
|
 |
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
K | E | V | A | R | Q | L | I | D | M | H | V | R | R | G | D | A | I | F | F | V | T | G | R | S | P | T | K | T | E | T | V | S | K | T | L | A | D | N | F | H | I | P | A | T | N | M | N | P | V | I | F | A | G | D | K | P | G | Q | N | T | K | S | Q | W | L | Q | D | K | N | I | R | I | F | Y | . |
. |
. |
. |
. |
Query Conservation |   |
|   |   |
|   |
|
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|
|   |
|
|
|   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
Template Sequence |   |
G | S | I | G | Q | A | V | T | K | E | I | F | K | R | N | P | Q | K | L | H | V | V | D | I | S | E | N | N | X | V | E | L | V | R | D | I | R | S | S | F | G | Y | I | N | G | D | F | Q | T | F | A | L | D | I | G | S | I | E | Y | D | A | F | I | K | A | D | G | Q | Y | D | Y | V | L | N | L | S | A | L | K | H |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |  |  |  |  |  |
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |
|
|
|
| S |  |  |  |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
  |   |
|
|
|
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
. | . | . |
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
G | D | S | D | N | D | I | T | A | A | R | D | V | G | A | R | G | I | R | I | L |
Query Conservation |   |
. | . | . |
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
Template Sequence |   |
V | R | S | E | K | D | P | F | T | L | X | R | X | I | D | V | N | V | F | N | T | D | K | T |
Template Known Secondary structure |   |
G | G | G | G | S | S |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|