Job Description P0AE22 Confidence 26.59% Date Thu Jan 5 11:22:16 GMT 2012 Rank 165 Aligned Residues 81 % Identity 14% Template c3ef1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase Resolution 2.15 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	W	V	S	V	A	Q	I	E	N	S	L	A	G	R	P	P	M	A	V	G	F	D	I	D	D	T	V	L	F	S	S	P	G	F	W	R	G	K	K	T	F	S	P	E	S	E	D	Y	L	K	N	P	V	F	W	E	K	M	N	N	G	W	D	E	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	L	E	S	E	N	V	K	R	L	R	Q	E	K	R	.	.	L	S	L	I	V	L	D	Q	T	I	I	H	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	P	T	V	G	E	W	M	S	D	P	G	N	V	N	Y	D	V	L	R	D	V	R	S	F	N	L	Q
Template Known Secondary structure															T	T		.	.							B	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T							T		T	T	S	T	T	T	G	G	G	T	T
Template Predicted Secondary structure																		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.																				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
																114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	K	E	V	A	R	Q	L	I	D	M	H	V	R	R	G	D	A	I	F	F	V	T	G	R	S	P	T	K	T	E	T	V	S	K	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.									.
Template Conservation																			.	.									.
Template Sequence		E	G	P	S	G	Y	T	S	C	Y	Y	I	K	F	R	P	G	.	.	L	A	Q	F	L	Q	K	I	.	S	E	L	Y	E	L	H	I	Y	T	M	G	T	K	A	Y	A	K	E	V	A	K	I	I
Template Known Secondary structure			T	T	T	T											T	T	.	.									.	T	T	T								S	S
Template Predicted Secondary structure																			.	.									.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions