Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE22
Confidence92.49%DateThu Jan 5 11:22:16 GMT 2012
Rank142Aligned Residues90
% Identity19%Templatec3b8eC_
PDB info PDB header:hydrolase/transport proteinChain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150.........160....
Predicted Secondary structure 





















.........................
Query SS confidence 






















































. . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  DEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNP. . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   
 



  
 

   
  


 






       
 


 
           .........................
Alig confidence 






..





















....



















.........................
Template Conservation   
 

  ..    
  
  


 
 




 ....  

  

   

                              

Template Sequence  IDPPRAA. . VPDAVGKCRSAGIKVIMVTGDH. . . . PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVV
Template Known Secondary structure 

B
SS..TT

SS
....TSS

S
BTTSSSSSSTTTTTTTT

SB
Template Predicted Secondary structure 





..






....






























Template SS confidence 















































































   585....590. ........600.........610... ......620.........630.........640.........650........
 
   165....170.........180... ......190.........200.....
Predicted Secondary structure  .......................





.









Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . .


















.





















Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . VIFAGDKPGQNTKSQWLQD. KNIRIFYGDSDNDITAARDVGA
Query Conservation  .......................

      

  
    

.
 


  



 

  
  
  
Alig confidence  .......................


















.





















Template Conservation   
  
  
               



 

  
  

  

  
  
 




 

  


 


Template Sequence  HGSDLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPASKKADI
Template Known Secondary structure  TT

TSS


S

TTT



SGGGTTSS
Template Predicted Secondary structure 


















Template SS confidence 
































































   659660.........670.........680.........690.........700.........710.........720...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions