 |
Job Description | P0AE22 | Confidence | 95.43% | Date | Thu Jan 5 11:22:16 GMT 2012 |
Rank | 122 | Aligned Residues | 85 |
% Identity | 20% | Template | c2iyeC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:copper-transporting atpase; |
PDBTitle: structure of catalytic cpx-atpase domain copb-b
|
Resolution | 2.6 Å |
|
 |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
D | E | F | S | I | P | K | E | V | A | R | Q | L | I | D | M | H | V | R | R | G | D | A | I | F | F | V | T | G | R | S | P | T | K | T | E | T | V | S | K | T | L | A | D | N | F | H | I | P | A | T | N | M | N | P | V | I | F | A | G | D | K | P | G | Q | N | T | K | S | Q | W | L | . |
Q | D | K | N | I | R | I |
Query Conservation |   |
  |
|   |
|
|
|
|   |   |
|   |
|
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   | . |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   | . | . |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|
|
|   | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
S | D | V | P | R | P | N | . |
. |
L | K | D | Y | L | E | K | L | K | N | E | G | L | K | I | I | I | L | S | G | D | K | . |
. |
. |
. |
E | D | K | V | K | E | L | S | K | E | L | N | I | Q | E | . |
. |
. |
. |
. |
Y | Y | S | N | L | S | P | E | D | K | V | R | I | I | E | K | L | K | Q | N | G | N | K | V | L |
Template Known Secondary structure |   |
 |  |  |  |
| S |
| . | . |
|  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  |  |
| S | S |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
| . | . | . | . | . |  |  |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
516 | . | . | . | 520 | . | . | |
|
. | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | |
|
|
|
. | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . |
  |
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | Y | G | D | S | D | N | D | I | T | A | A | R | D | V | G | A |
Query Conservation |   |
  |   |
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|
Template Sequence |   |
M | I | G | D | G | V | N | D | A | A | A | L | A | L | A | D | V |
Template Known Secondary structure |   |
 |  |  |
| S | T | T | T |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
585 | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|